RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SLAMF1Q13291 335 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 HERPUD1Q15011 391 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 PDK2Q15119 407 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 ACTBL2Q562R1 376 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 XKR7Q5GH72 579 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 COQ5Q5HYK3 327 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 Q6P435 159 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 ASCL4Q6XD76 172 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 DPY19L2P2Q6ZN68 376 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 UTS2BQ765I0 119 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 ABHD12BQ7Z5M8 362 aaPredicted RBP2.14□□□□□ -2.07
CLK1-204ENST00000432425 SLC51BQ86UW2 128 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 PAQR7Q86WK9 346 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 BOD1L2Q8IYS8 172 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 PQLC3Q8N755 202 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 NFAM1Q8NET5 270 aaPredicted RBP2.14□□□□□ -2.07
CLK1-204ENST00000432425 ZNF397Q8NF99 534 aaPredicted RBP2.14□□□□□ -2.07
CLK1-204ENST00000432425 OR13C9Q8NGT0 318 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 TRMT10AQ8TBZ6 339 aaKnown RBP2.14□□□□□ -2.07
CLK1-204ENST00000432425 MARCH1Q8TCQ1 289 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 FAM3CQ92520 227 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 NRGNQ92686 78 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 FAM104AQ969W3 186 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 TMEM45BQ96B21 275 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 OTUB2Q96DC9 234 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 TSSK3Q96PN8 268 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 CGREF1Q99674 301 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 C7orf50Q9BRJ6 194 aaKnown RBP2.14□□□□□ -2.07
CLK1-204ENST00000432425 FAM107BQ9H098 131 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 POLR3FQ9H1D9 316 aaPredicted RBP2.14□□□□□ -2.07
CLK1-204ENST00000432425 PTGES2Q9H7Z7 377 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 COG4Q9H9E3 785 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 DMAP1Q9NPF5 467 aaPredicted RBP2.14□□□□□ -2.07
CLK1-204ENST00000432425 ZDHHC4Q9NPG8 344 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 PXMP2Q9NR77 195 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 TREX1Q9NSU2 369 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 SLC2A8Q9NY64 477 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 C3orf18Q9UK00 162 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 CDH9Q9ULB4 789 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 KPTNQ9Y664 436 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 SLCO1B1Q9Y6L6 691 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 GRIN2DO15399 1336 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 MN1Q10571 1320 aaPredicted RBP2.14□□□□□ -2.07
CLK1-204ENST00000432425 FRMPD4Q14CM0 1322 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 MAP3K15Q6ZN16 1313 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 CDHR2Q9BYE9 1310 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 CUX2O14529 1486 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 RLFQ13129 1914 aa2.14□□□□□ -2.07
CLK1-204ENST00000432425 NACADO15069 1562 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 MEGF6O75095 1541 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 PTPRUQ92729 1446 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CPDO75976 1380 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 FUOMA2VDF0 154 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 FABP12A6NFH5 140 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ARGFXA6NJG6 315 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 SERPINE3A8MV23 424 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ERVV-1B6SEH8 477 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 F8VP50 259 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 MAGEB4O15481 346 aaPredicted RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 SNAI2O43623 268 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 GATCO43716 136 aaKnown RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 EFNA2O43921 213 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 RPP14O95059 124 aaKnown RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 SCELO95171 688 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 LYPLA2O95372 231 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 H6PDO95479 791 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 NDUFB10O96000 172 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CST1P01037 141 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 APOEP02649 317 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 IFNA6P05013 189 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 HMGN1P05114 100 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CRYGBP07316 175 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ERCC1P07992 297 aaPredicted RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 SERPINA6P08185 405 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 PLEKP08567 350 aaPredicted RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 CTXN2P0C2S0 81 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 MCF2P10911 925 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ETS2P15036 469 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 POLR2EP19388 210 aaKnown RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 DPP4P27487 766 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 LAP3P28838 519 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CEACAM3P40198 252 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CCT3P49368 545 aaKnown RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 SGSHP51688 502 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 RGS8P57771 180 aaPredicted RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 RPL32P62910 135 aaKnown RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 IL9RQ01113 521 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CSTF1Q05048 431 aaKnown RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 IFFO1Q0D2I5 559 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 ITIH4Q14624 930 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 KLHL38Q2WGJ6 581 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 C18orf21Q32NC0 220 aaPredicted RBP2.13□□□□□ -2.07
CLK1-204ENST00000432425 CTSL3PQ5NE16 218 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 IL23RQ5VWK5 629 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 SPOPLQ6IQ16 392 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 UFSP1Q6NVU6 142 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 KCNIP4Q6PIL6 250 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CCDC121Q6ZUS5 278 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 SLC35D2Q76EJ3 337 aa2.13□□□□□ -2.07
CLK1-204ENST00000432425 CBWD2Q8IUF1 395 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms