RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 MALT1Q9UDY8 824 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ZNF346Q9UL40 294 aaKnown RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 IER3IP1Q9Y5U9 82 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 INTS1Q8N201 2190 aaKnown RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 FAM90A27PA6NNH2 459 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 ZNF587BE7ETH6 402 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 AHCYL1O43865 530 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 TRMUO75648 421 aaKnown RBP9.74□□□□□ -0.85
CHD4-202ENST00000430771 RENP00797 406 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 HMGN1P05114 100 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 IGFBP1P08833 259 aaPredicted RBP9.74□□□□□ -0.85
CHD4-202ENST00000430771 PGA4P0DJD7 388 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 PGA3P0DJD8 388 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 ACADSP16219 412 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 PTDSS1P48651 473 aaKnown RBP9.74□□□□□ -0.85
CHD4-202ENST00000430771 ASCL1P50553 236 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 MYBPC1Q00872 1141 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.74□□□□□ -0.85
CHD4-202ENST00000430771 GINS1Q14691 196 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 PTGES3Q15185 160 aaKnown RBP9.74□□□□□ -0.85
CHD4-202ENST00000430771 SNCBQ16143 134 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 CARD17Q5XLA6 110 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 FBXW9Q5XUX1 488 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 FBXW10Q5XX13 1052 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 DNM1P34Q6PK57 102 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 BEND4Q6ZU67 534 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 BTLAQ7Z6A9 289 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 C20orf196Q8IYI0 205 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 UBE2J2Q8N2K1 259 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 GALNT4Q8N4A0 578 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 IQCF1Q8N6M8 205 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 RELL2Q8NC24 303 aaPredicted RBP9.74□□□□□ -0.85
CHD4-202ENST00000430771 ZNF555Q8NEP9 628 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 OR4Q3Q8NH05 313 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 CA5BP1Q8WTZ4 195 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 RASD2Q96D21 266 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 STARD4Q96DR4 205 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 TXNDC15Q96J42 360 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 LRR1Q96L50 414 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 ULBP2Q9BZM5 246 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 TOR3AQ9H497 397 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 PLSCR4Q9NRQ2 329 aa9.74□□□□□ -0.85
CHD4-202ENST00000430771 FOXD3Q9UJU5 478 aaPredicted RBP9.74□□□□□ -0.85
CHD4-202ENST00000430771 PRSS37A4D1T9 235 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 ZAR1LA6NP61 321 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 H0YJX3 145 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 M0R3G1 203 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 ARHGEF9O43307 516 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 AGFG2O95081 481 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 CGAP01215 116 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 HIST1H1CP16403 213 aaKnown RBP9.73□□□□□ -0.85
CHD4-202ENST00000430771 PAICSP22234 425 aaKnown RBP9.73□□□□□ -0.85
CHD4-202ENST00000430771 VHLP40337 213 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 GIPRP48546 466 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 HSPA13P48723 471 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 SH3BGRP55822 239 aaPredicted RBP9.73□□□□□ -0.85
CHD4-202ENST00000430771 CDC42P60953 191 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 CDK5Q00535 292 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 STK11Q15831 433 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 ZIK1Q3SY52 487 aaPredicted RBP9.73□□□□□ -0.85
CHD4-202ENST00000430771 TSPO2Q5TGU0 170 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 SLX4IPQ5VYV7 408 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 LEG1Q6P5S2 330 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 XKRXQ6PP77 449 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 NHLRC1Q6VVB1 395 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 Q6ZT83 130 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.73□□□□□ -0.85
CHD4-202ENST00000430771 SDR9C7Q8NEX9 313 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 OR4K13Q8NH42 304 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 NRG4Q8WWG1 115 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 HDAC2Q92769 488 aaKnown RBP9.73□□□□□ -0.85
CHD4-202ENST00000430771 TMEM54Q969K7 222 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 RBP7Q96R05 134 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 KCNK17Q96T54 332 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 ENKD1Q9H0I2 346 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 OPN3Q9H1Y3 402 aaPredicted RBP9.73□□□□□ -0.85
CHD4-202ENST00000430771 CMC2Q9NRP2 79 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 GLTPQ9NZD2 209 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 VSX1Q9NZR4 365 aaPredicted RBP9.73□□□□□ -0.85
CHD4-202ENST00000430771 PRSS50Q9UI38 385 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 HIVEP3Q5T1R4 2406 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 MYO7BQ6PIF6 2116 aa9.73□□□□□ -0.85
CHD4-202ENST00000430771 H7C1C5 153 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 PYCARD-AS1I3L0S3 204 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 SURF4O15260 269 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 ZG16O60844 167 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 CLDN14O95500 239 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 SNAP29O95721 258 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 IGHV3-9P01782 118 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 CRABP1P29762 137 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 ZNF84P51523 738 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 LCN6P62502 163 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 KEAP1Q14145 624 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 SNAPC1Q16533 368 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 THEM4Q5T1C6 240 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 SLC35F1Q5T1Q4 408 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 TTC23Q5W5X9 447 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 C12orf73Q69YU5 71 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 LUZP2Q86TE4 346 aa9.72□□□□□ -0.85
CHD4-202ENST00000430771 DEPDC4Q8N2C3 294 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms