RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MSMPQ1L6U9 139 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 AGKQ53H12 422 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 BEND6Q5SZJ8 279 aaPredicted RBP12.81□□□□□ -0.36
MSH5-208ENST00000429846 AGBL2Q5U5Z8 902 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 SLC30A8Q8IWU4 369 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 STON2Q8WXE9 905 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 ARHGDIGQ99819 225 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 ZNF385DQ9H6B1 395 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 SLCO1B3Q9NPD5 702 aa12.81□□□□□ -0.36
MSH5-208ENST00000429846 LEF1Q9UJU2 399 aaPredicted RBP12.81□□□□□ -0.36
MSH5-208ENST00000429846 ZNF346Q9UL40 294 aaKnown RBP12.81□□□□□ -0.36
MSH5-208ENST00000429846 SLC22A23A1A5C7 686 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 C11orf98E9PRG8 122 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 M0R3H8 397 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 HAX1O00165 279 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 SERPINI2O75830 405 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 FARS2O95363 451 aaKnown RBP12.8□□□□□ -0.36
MSH5-208ENST00000429846 TFP02787 698 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 SERPINA5P05154 406 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 SRP14P37108 136 aaKnown RBP12.8□□□□□ -0.36
MSH5-208ENST00000429846 GPR6P46095 362 aaPredicted RBP12.8□□□□□ -0.36
MSH5-208ENST00000429846 ZP4Q12836 540 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 ZNF74Q16587 644 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 CYP51A1Q16850 503 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 NRN1LQ496H8 165 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 RUNDC3AQ59EK9 446 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 ELFN2Q5R3F8 820 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 DLEU7Q6UYE1 221 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 SLC35D2Q76EJ3 337 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 DPPA2Q7Z7J5 298 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 GLCCI1Q86VQ1 547 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 PTOV1Q86YD1 416 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 SMYD1Q8NB12 490 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 RDH5Q92781 318 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 TMEM54Q969K7 222 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 ZNF566Q969W8 418 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 MPP4Q96JB8 637 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 SYT3Q9BQG1 590 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 WFDC6Q9BQY6 131 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 SLC19A3Q9BZV2 496 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 C1orf198Q9H425 327 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 NANSQ9NR45 359 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 GLTPQ9NZD2 209 aa12.8□□□□□ -0.36
MSH5-208ENST00000429846 OR8G3PP0DMU2 310 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 ALDH3B1P43353 468 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 TMEM33P57088 247 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 SRSF2Q01130 221 aaKnown RBP12.79□□□□□ -0.36
MSH5-208ENST00000429846 SCGB2A2Q13296 93 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 CCNIQ14094 377 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 RAB39AQ14964 217 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 DUSP7Q16829 419 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 MMEL1Q495T6 779 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 ENTPD8Q5MY95 495 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 TTC33Q6PID6 262 aaPredicted RBP12.79□□□□□ -0.36
MSH5-208ENST00000429846 DEF8Q6ZN54 512 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 DHDDSQ86SQ9 333 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 PATL1Q86TB9 770 aaKnown RBP12.79□□□□□ -0.36
MSH5-208ENST00000429846 WDFY1Q8IWB7 410 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 SLC22A24Q8N4F4 322 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 DPP10Q8N608 796 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 OR6T1Q8NGN1 323 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 ADAMTS16Q8TE57 1224 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 RASSF5Q8WWW0 418 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 SLC25A44Q96H78 314 aaPredicted RBP12.79□□□□□ -0.36
MSH5-208ENST00000429846 ZNF426Q9BUY5 554 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 TMEM38BQ9NVV0 291 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 GPR160Q9UJ42 338 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 ZNF229Q9UJW7 825 aa12.79□□□□□ -0.36
MSH5-208ENST00000429846 NBEAL1Q6ZS30 2694 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 A0A0A6YYJ9 748 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 A0A1W2PPW3 197 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 TRAPPC13A5PLN9 417 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 CPSF4LA6NMK7 179 aaKnown RBP12.78□□□□□ -0.36
MSH5-208ENST00000429846 LYNX1G3V0Z9 82 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 M0QX08 132 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 RNF13O43567 381 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 HPXP02790 462 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 OPN1SWP03999 348 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 LYNX1P0DP58 116 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 SAGP10523 405 aaPredicted RBP12.78□□□□□ -0.36
MSH5-208ENST00000429846 SELENOVP59797 346 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 NPTX1Q15818 432 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 INTS11Q5TA45 600 aaKnown RBP12.78□□□□□ -0.36
MSH5-208ENST00000429846 RGS7BPQ6MZT1 257 aaPredicted RBP12.78□□□□□ -0.36
MSH5-208ENST00000429846 WDR88Q6ZMY6 472 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 RINLQ6ZS11 566 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 ZNF584Q8IVC4 421 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 TSPEARQ8WU66 669 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 CGREF1Q99674 301 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 ZNF416Q9BWM5 594 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 RACGAP1Q9H0H5 632 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 PCDHAC1Q9H158 963 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 TAS2R5Q9NYW4 299 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 MYEF2Q9P2K5 600 aaKnown RBP12.78□□□□□ -0.36
MSH5-208ENST00000429846 METRNQ9UJH8 293 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 NDUFAF1Q9Y375 327 aa12.78□□□□□ -0.36
MSH5-208ENST00000429846 GRIP1Q9Y3R0 1128 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms