RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 RTN4RQ9BZR6 473 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 MTHFD2LQ9H903 347 aaPredicted RBP4.87□□□□□ -1.63
C9orf3-205ENST00000427193 PROK2Q9HC23 129 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF160Q9HCG1 818 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 EQTNQ9NQ60 294 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 ARMC1Q9NVT9 282 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 ADA2Q9NZK5 511 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 P2RX2Q9UBL9 471 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 COPS7AQ9UBW8 275 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 PRDM4Q9UKN5 801 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 ACAD8Q9UKU7 415 aa4.87□□□□□ -1.63
C9orf3-205ENST00000427193 FLNAP21333 2647 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 A0A1W2PQD3 144 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 OR6C68A6NDL8 312 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 A8MUI8 341 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 PRAC2D3DTV9 90 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 FAAHO00519 579 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 TPST1O60507 370 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 LMX1BO60663 402 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 UGT2B11O75310 529 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ENTPD5O75356 428 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 STX11O75558 287 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 LYPD3O95274 346 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 LGI1O95970 557 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 BCHEP06276 602 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 GPIP06744 558 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 PABPC4LP0CB38 370 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 PRKAR1AP10644 381 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 UMPSP11172 480 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 NCK1P16333 377 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 OTX2P32243 289 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF136P52737 540 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 PNLIPRP2P54317 469 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ATP12AP54707 1039 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 SELENOWP63302 87 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 FAM27E3Q08E93 113 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ARL16Q0P5N6 197 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF155Q12901 538 aaPredicted RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 AIMP2Q13155 320 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 FLOT2Q14254 428 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 GNA13Q14344 377 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 NPTX1Q15818 432 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 NRF1Q16656 503 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 CYP51A1Q16850 503 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 DEFB109BQ30KR1 87 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 CYBRD1Q53TN4 286 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ACER2Q5QJU3 275 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 CCNJQ5T5M9 372 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 INTS11Q5TA45 600 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ATP1A1-AS1Q5TC04 95 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 MFSD4BQ5TF39 518 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ADAM5Q6NVV9 412 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 PGBD2Q6P3X8 592 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 IGFL3Q6UXB1 125 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 RPS19BP1Q86WX3 136 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 DHFR2Q86XF0 187 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ARMC8Q8IUR7 673 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 DND1Q8IYX4 353 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF619Q8N2I2 560 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 COX18Q8N8Q8 333 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 POGLUT1Q8NBL1 392 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 OR4D11Q8NGI4 311 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 NFKBIDQ8NI38 313 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 FBXO30Q8TB52 745 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 GPR151Q8TDV0 419 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 PAQR8Q8TEZ7 354 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 CANT1Q8WVQ1 401 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 TMBIM1Q969X1 311 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 MCUR1Q96AQ8 359 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF524Q96C55 264 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 CCDC124Q96CT7 223 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 OTUB1Q96FW1 271 aaPredicted RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 NSMCE2Q96MF7 247 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 RNF145Q96MT1 663 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 UHRF2Q96PU4 802 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 RAB3IPQ96QF0 476 aaPredicted RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ARHGDIGQ99819 225 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 MAGIXQ9H6Y5 334 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 IL1RAPQ9NPH3 570 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 EXD2Q9NVH0 621 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 CALML5Q9NZT1 146 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 FLRT3Q9NZU0 649 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 BCAP29Q9UHQ4 241 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 MKLN1Q9UL63 735 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ABCG2Q9UNQ0 655 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 YARS2Q9Y2Z4 477 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 WDR45Q9Y484 360 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 PCDHGB3Q9Y5G1 929 aa4.86□□□□□ -1.63
C9orf3-205ENST00000427193 CHCHD2Q9Y6H1 151 aaPredicted RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 FBN1P35555 2871 aaKnown RBP4.86□□□□□ -1.63
C9orf3-205ENST00000427193 ZGRF1Q86YA3 2104 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 NOTCH3Q9UM47 2321 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 FAM90A20PA6NIJ5 464 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 CLDN24A6NM45 220 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 C17orf100A8MU93 164 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 FAM157AC9JC47 383 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 NPIPB11E5RHQ5 1161 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 PEX12O00623 359 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 FFAR1O14842 300 aa4.85□□□□□ -1.63
C9orf3-205ENST00000427193 TIMM23O14925 209 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms