RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 POU3F1Q03052 451 aaPredicted RBP6.53□□□□□ -1.36
LINC01049-201ENST00000426840 LGALS3BPQ08380 585 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 SNTB1Q13884 538 aaKnown RBP6.53□□□□□ -1.36
LINC01049-201ENST00000426840 GK3PQ14409 553 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 PHYHD1Q5SRE7 291 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 ARMC4Q5T2S8 1044 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 FBXW9Q5XUX1 488 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 HIST2H2BCQ6DN03 193 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 HMBOX1Q6NT76 420 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 PGBD2Q6P3X8 592 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 NIPAL3Q6P499 406 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 CASP12Q6UXS9 341 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 STAC2Q6ZMT1 411 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 Q6ZT83 130 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 C22orf34Q6ZV56 151 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 SLC35D2Q76EJ3 337 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 LINGO2Q7L985 606 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 NANOGNBQ7Z5D8 188 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 STK32CQ86UX6 486 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 TMEM123Q8N131 208 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 LINC00471Q8N535 108 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 OR9Q2Q8NGE9 314 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 OR13C2Q8NGS9 318 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 APH1AQ96BI3 265 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 EAF1Q96JC9 268 aaPredicted RBP6.53□□□□□ -1.36
LINC01049-201ENST00000426840 RAB3IPQ96QF0 476 aaPredicted RBP6.53□□□□□ -1.36
LINC01049-201ENST00000426840 OR2M2Q96R28 347 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 LINC00470Q9BZP3 86 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 YY1AP1Q9H869 796 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 REEP1Q9H902 201 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 INIPQ9NRY2 104 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 ZNF346Q9UL40 294 aaKnown RBP6.53□□□□□ -1.36
LINC01049-201ENST00000426840 RCE1Q9Y256 329 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 SAMHD1Q9Y3Z3 626 aaKnown RBP6.53□□□□□ -1.36
LINC01049-201ENST00000426840 U3KQV3 271 aa6.53□□□□□ -1.36
LINC01049-201ENST00000426840 FAM221AA4D161 298 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 NPIPB13A6NJU9 1138 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 NPIPB4C9JG80 1138 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 MCIDASD6RGH6 385 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 ANKRD65E5RJM6 399 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 C16orf97H3BN30 126 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 H3BNX3 289 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 GNGT2O14610 69 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 SLC43A1O75387 559 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 SERPINI2O75830 405 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 BCL10O95999 233 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 TP53P04637 393 aaPredicted RBP6.52□□□□□ -1.37
LINC01049-201ENST00000426840 POU2F1P14859 743 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 PSMB1P20618 241 aaKnown RBP6.52□□□□□ -1.37
LINC01049-201ENST00000426840 COX5AP20674 150 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 IGHV1-2P23083 117 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 FPR3P25089 353 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 UGT2B10P36537 528 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 IFNGR2P38484 337 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 BIDP55957 195 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 CTXN1P60606 82 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 PRPS1P60891 318 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 SORDQ00796 357 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 IL1RL1Q01638 556 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 RUNX1T1Q06455 604 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 FAPQ12884 760 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 TSPAN31Q12999 210 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 ITGADQ13349 1161 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 CAMK2DQ13557 499 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 MELKQ14680 651 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 P2RY6Q15077 328 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 TSC22D1Q15714 1073 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 ATP6AP1Q15904 470 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 ACKR1Q16570 336 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 HIST3H3Q16695 136 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 ALG10Q5BKT4 473 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 SFRP5Q5T4F7 317 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 AMIGO2Q86SJ2 522 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 CDH24Q86UP0 819 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 IGFN1Q86VF2 1251 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
LINC01049-201ENST00000426840 KIF18BQ86Y91 864 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 C20orf196Q8IYI0 205 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 HS3ST5Q8IZT8 346 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF433Q8N7K0 673 aaPredicted RBP6.52□□□□□ -1.37
LINC01049-201ENST00000426840 POMGNT2Q8NAT1 580 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 OR6X1Q8NH79 312 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 GIPC3Q8TF64 312 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 PYDC1Q8WXC3 89 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 ASB10Q8WXI3 467 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 GATAD2BQ8WXI9 593 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 LRTOMTQ8WZ04 291 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 TMEM54Q969K7 222 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 LRRC46Q96FV0 321 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 LRR1Q96L50 414 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 ADAD1Q96M93 576 aaKnown RBP6.52□□□□□ -1.37
LINC01049-201ENST00000426840 MUS81Q96NY9 551 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 FEVQ99581 238 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 HDHD5Q9BXW7 423 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 DGCR6LQ9BY27 220 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 MRPL13Q9BYD1 178 aaKnown RBP6.52□□□□□ -1.37
LINC01049-201ENST00000426840 SLCO5A1Q9H2Y9 848 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 TXNIPQ9H3M7 391 aa6.52□□□□□ -1.37
LINC01049-201ENST00000426840 KRCC1Q9NPI7 259 aaPredicted RBP6.52□□□□□ -1.37
LINC01049-201ENST00000426840 NRIP3Q9NQ35 241 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms