RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 COX15Q7KZN9 410 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 PTOV1Q86YD1 416 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 ZNF610Q8N9Z0 462 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 NRIP3Q9NQ35 241 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 NLKQ9UBE8 527 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 NOTOA8MTQ0 251 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 P2RY10O00398 339 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 PRR35P0CG20 571 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 PLGLAQ15195 96 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 PGAP1Q75T13 922 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 OR52N1Q8NH53 320 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 TMEM106AQ96A25 262 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 OXGR1Q96P68 337 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 OR52A1Q9UKL2 312 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 TRAV17A0A0B4J275 112 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 SELENOFO60613 162 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 KNG1P01042 644 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 CRYABP02511 175 aaKnown RBP12.68□□□□□ -0.38
RPL28-202ENST00000426763 SCG5P05408 212 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 SSPNQ14714 243 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 ACKR1Q16570 336 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 WDR5BQ86VZ2 330 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
RPL28-202ENST00000426763 BEST3Q8N1M1 668 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 B3GALT5Q9Y2C3 310 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 ANKUB1A6NFN9 424 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 CLDN15P56746 228 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 RIPPLY1Q0D2K3 151 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 SYT14P1Q58G82 188 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 WDR74Q6RFH5 385 aaPredicted RBP12.68□□□□□ -0.38
RPL28-202ENST00000426763 SGPP2Q8IWX5 399 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 HSD17B8Q92506 261 aa12.68□□□□□ -0.38
RPL28-202ENST00000426763 VRK1Q99986 396 aaPredicted RBP12.68□□□□□ -0.38
RPL28-202ENST00000426763 SLC33A1O00400 549 aaPredicted RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 QDPRP09417 244 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 MAP2K6P52564 334 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 DSCR4P56555 118 aaPredicted RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 YBX1P67809 324 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 RAE1P78406 368 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 OR1C1Q15619 314 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 OR2L13Q8N349 312 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 ARIH2OSQ8N7S6 290 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 ERVMER34-1Q9H9K5 563 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 DECR2Q9NUI1 292 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 HDGFL3Q9Y3E1 203 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 D6RAR5 112 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 RPS23P62266 143 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 YIF1BQ5BJH7 314 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 THEM4Q5T1C6 240 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 FAM117AQ9C073 453 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 PLAC1Q9HBJ0 212 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 NOX4Q9NPH5 578 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 ZFP57Q9NU63 452 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 B3GAT1Q9P2W7 334 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 FBXL4Q9UKA2 621 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 PARP14Q460N5 1801 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 RPS25P62851 125 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 LSAMPQ13449 338 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 EXOSC6Q5RKV6 272 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 BCDIN3DQ7Z5W3 292 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 ANKRD37Q7Z713 158 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 SLC15A4Q8N697 577 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 OR56B1Q8NGI3 324 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 STK35Q8TDR2 534 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 TCEAL3Q969E4 200 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 FAM173AQ9BQD7 235 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 AIFM2Q9BRQ8 373 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 GABARAPL1Q9H0R8 117 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 ZNF346Q9UL40 294 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 PCDHGA1Q9Y5H4 931 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 HRH3Q9Y5N1 445 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 SMCO3A2RU48 225 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 HPGDSO60760 199 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 CBX7O95931 251 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 TBXA2RP21731 343 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 MRPL41Q8IXM3 137 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 KCTD12Q96CX2 325 aaKnown RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 PRRT1Q99946 306 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 RANBP3Q9H6Z4 567 aaPredicted RBP12.67□□□□□ -0.38
RPL28-202ENST00000426763 CMC2Q9NRP2 79 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 PCDHGA5Q9Y5G8 931 aa12.67□□□□□ -0.38
RPL28-202ENST00000426763 SERPINE2P07093 398 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 RPL18Q07020 188 aaKnown RBP12.66□□□□□ -0.38
RPL28-202ENST00000426763 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 ACBD4Q8NC06 268 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 IL1F10Q8WWZ1 152 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 TEAD3Q99594 435 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 PHB2Q99623 299 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 THAP7Q9BT49 309 aaPredicted RBP12.66□□□□□ -0.38
RPL28-202ENST00000426763 TSPAN10Q9H1Z9 355 aaPredicted RBP12.66□□□□□ -0.38
RPL28-202ENST00000426763 B3GALT1Q9Y5Z6 326 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 GREB1LQ9C091 1923 aaPredicted RBP12.66□□□□□ -0.38
RPL28-202ENST00000426763 AGAP14A8MT82 685 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 LINC01387J3KSC0 135 aa12.66□□□□□ -0.38
RPL28-202ENST00000426763 PRAMEF4O60810 478 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms