RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 MNTQ99583 582 aa13.62□□□□□ -0.23
ACTB-204ENST00000425660 FAM173AQ9BQD7 235 aa13.62□□□□□ -0.23
ACTB-204ENST00000425660 MFRPQ9BY79 579 aa13.62□□□□□ -0.23
ACTB-204ENST00000425660 SSR3Q9UNL2 185 aa13.62□□□□□ -0.23
ACTB-204ENST00000425660 COPS3Q9UNS2 423 aa13.62□□□□□ -0.23
ACTB-204ENST00000425660 B9D1Q9UPM9 204 aa13.62□□□□□ -0.23
ACTB-204ENST00000425660 IGLV1-36A0A0B4J1U3 117 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 FAM171A2A8MVW0 826 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 NPIPA5E9PKD4 350 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 ZNF670-ZNF695F2Z2N8 137 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 SULT2B1O00204 365 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 PLPP2O43688 288 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 OPN1LWP04000 364 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 INHBBP09529 407 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 GAAP10253 952 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 HCCSP53701 268 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 OR12D2P58182 307 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 GPR85P60893 370 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 RPS25P62851 125 aaKnown RBP13.61□□□□□ -0.23
ACTB-204ENST00000425660 OR1C1Q15619 314 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 ATP1A1-AS1Q5TC04 95 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 DTNBP1Q96EV8 351 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 OR2B2Q9GZK3 357 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 TSPAN10Q9H1Z9 355 aaPredicted RBP13.61□□□□□ -0.23
ACTB-204ENST00000425660 TXNL4BQ9NX01 149 aaKnown RBP13.61□□□□□ -0.23
ACTB-204ENST00000425660 CCDC59Q9P031 241 aaKnown RBP13.61□□□□□ -0.23
ACTB-204ENST00000425660 KLHL13Q9P2N7 655 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 BOKQ9UMX3 212 aaPredicted RBP13.61□□□□□ -0.23
ACTB-204ENST00000425660 NPIPA1Q9UND3 350 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 A3GALT2U3KPV4 340 aa13.61□□□□□ -0.23
ACTB-204ENST00000425660 PINLYPA6NC86 204 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 GJE1A6NN92 205 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 ZNF814B7Z6K7 855 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 CRABP1P29762 137 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 SERPINB10P48595 397 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 OR2B6P58173 313 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 CRTC2Q53ET0 693 aaPredicted RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 ZNF684Q5T5D7 378 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 CDC20BQ86Y33 519 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 ZFP41Q8N8Y5 198 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 FAM83FQ8NEG4 500 aaPredicted RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 OR2M7Q8NG81 312 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 KCNE4Q8WWG9 221 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 TMEM203Q969S6 136 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 MRPL48Q96GC5 212 aaKnown RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 TM9SF2Q99805 663 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 MRPL13Q9BYD1 178 aaKnown RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 RNF32Q9H0A6 362 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 SIRT4Q9Y6E7 314 aaPredicted RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 CFAP47Q6ZTR5 3102 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 PNMA8CA0A1B0GUJ8 204 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 TRDV1A0A1B0GX56 115 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 E9PI62 339 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 DNPH1O43598 174 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 TRAF3IP2O43734 574 aaPredicted RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 EIF1BO60739 113 aaKnown RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 F10P00742 488 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 HLA-DPB1P04440 258 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 CTLA4P16410 223 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 FABP5Q01469 135 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 MOGQ16653 247 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 AGAP7PQ5VUJ5 663 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 VASH2Q86V25 355 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 WDFY1Q8IWB7 410 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 UEVLDQ8IX04 471 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 PELI1Q96FA3 418 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 TXNDC15Q96J42 360 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 AGAP4Q96P64 663 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 OXGR1Q96P68 337 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 NXF2Q9GZY0 626 aaKnown RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 EXOSC4Q9NPD3 245 aaKnown RBP13.6□□□□□ -0.23
ACTB-204ENST00000425660 MED29Q9NX70 200 aa13.6□□□□□ -0.23
ACTB-204ENST00000425660 SPTBN2O15020 2390 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 LOC400499M0QZD8 3231 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 DCDC2BA2VCK2 349 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 ARGFXA6NJG6 315 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 J3QLW9 94 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 LRRTM2O43300 516 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 SLC16A7O60669 478 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 ZNF19P17023 458 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 CSNK2A1P68400 391 aaPredicted RBP13.59□□□□□ -0.23
ACTB-204ENST00000425660 GLO1Q04760 184 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 RSPO4Q2I0M5 234 aaPredicted RBP13.59□□□□□ -0.23
ACTB-204ENST00000425660 DMKNQ6E0U4 476 aaPredicted RBP13.59□□□□□ -0.23
ACTB-204ENST00000425660 LINC00696Q6ZRV3 163 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 ASB18Q6ZVZ8 466 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 MDS2Q8NDY4 140 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 OR14L1PQ8NHC6 308 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 SNX33Q8WV41 574 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 KLHL15Q96M94 604 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 INTS14Q96SY0 518 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 ZNF703Q9H7S9 590 aaPredicted RBP13.59□□□□□ -0.23
ACTB-204ENST00000425660 WDR76Q9H967 626 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 RASD1Q9Y272 281 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 TMEM14AQ9Y6G1 99 aa13.59□□□□□ -0.23
ACTB-204ENST00000425660 ALPK2Q86TB3 2170 aa13.58□□□□□ -0.23
ACTB-204ENST00000425660 ZFHX4Q86UP3 3567 aa13.58□□□□□ -0.23
ACTB-204ENST00000425660 OR5H15A6NDH6 313 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 CENPBD1B2RD01 187 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms