RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ELOA3Q8NG57 546 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 PHOSPHO1Q8TCT1 267 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 RBP7Q96R05 134 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 CNN2Q99439 309 aaKnown RBP11.83□□□□□ -0.52
COL12A1-205ENST00000425443 TWSG1Q9GZX9 223 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 ZNF768Q9H5H4 540 aaKnown RBP11.83□□□□□ -0.52
COL12A1-205ENST00000425443 C2orf42Q9NWW7 574 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 AUP1Q9Y679 476 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 MEIKINA0A087WXM9 373 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 TMEM238LA0A1B0GVL6 79 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 LINC00862A6NCI5 91 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 SERINC4A6NH21 518 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 H2AFB2P0C5Z0 115 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 PRTGQ2VWP7 1150 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 CHMP1BQ7LBR1 199 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 GKN2Q86XP6 184 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 OR2M2Q96R28 347 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 TSPAN10Q9H1Z9 355 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-205ENST00000425443 PDE7BQ9NP56 450 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 RP1P56715 2156 aa11.83□□□□□ -0.52
COL12A1-205ENST00000425443 A0A1B0GTH9 108 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 C17orf105B2RV13 164 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 GDNFP39905 211 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 GRK6P43250 576 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 CDK5R1Q15078 307 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 C17orf107Q6ZR85 190 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 OR2T4Q8NH00 348 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 MRPL48Q96GC5 212 aaKnown RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 C20orf85Q9H1P6 137 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 NOX4Q9NPH5 578 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 NIT2Q9NQR4 276 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 KLK11Q9UBX7 282 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 RCE1Q9Y256 329 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 KLF2Q9Y5W3 355 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SIGLEC5O15389 551 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SNAPINO95295 136 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 NSA2O95478 260 aaKnown RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 F13BP05160 661 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 CAPZBP47756 277 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 FNTBP49356 437 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 GFERP55789 205 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SIGLEC14Q08ET2 396 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SWI5Q1ZZU3 235 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 DEFB133Q30KQ1 61 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 FAM199XQ6PEV8 388 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SEZ6L2Q6UXD5 910 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 NLRC3Q7RTR2 1065 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 MS4A15Q8N5U1 240 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 DNAAF1Q8NEP3 725 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 RNF166Q96A37 237 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SLC25A38Q96DW6 304 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SMIM19Q96E16 107 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 VRK1Q99986 396 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 OR8D2Q9GZM6 311 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 ZCCHC4Q9H5U6 513 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 METTL17Q9H7H0 456 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SRA1Q9HD15 236 aaKnown RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 PRODH2Q9UF12 536 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 OGG1O15527 345 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 RRP8O43159 456 aaKnown RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 RAD1O60671 282 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SDC3O75056 442 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 CT45A8P0DMV1 189 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 CT45A9P0DMV2 189 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SIRPAP78324 504 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SNTB2Q13425 540 aaKnown RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 ZNF141Q15928 474 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 AANATQ16613 207 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 CT45A2Q5DJT8 189 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 SLC35F2Q8IXU6 374 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 POC1BQ8TC44 478 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 GAL3ST4Q96RP7 486 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 PAPOLGQ9BWT3 736 aaKnown RBP11.82□□□□□ -0.52
COL12A1-205ENST00000425443 CA10Q9NS85 328 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 NPFFR2Q9Y5X5 522 aa11.82□□□□□ -0.52
COL12A1-205ENST00000425443 TVP23AA6NH52 213 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 EFCAB7A8K855 629 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 SERPINA3P01011 423 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 IFI6P09912 130 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 GPR3P46089 330 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 STARP49675 285 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 VEGFCP49767 419 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 P2RY4P51582 365 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 NANOS3P60323 173 aaKnown RBP11.81□□□□□ -0.52
COL12A1-205ENST00000425443 PLA2G7Q13093 441 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 SMAD2Q15796 467 aaKnown RBP11.81□□□□□ -0.52
COL12A1-205ENST00000425443 HSD17B12Q53GQ0 312 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 GPR139Q6DWJ6 353 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 TTLL10Q6ZVT0 673 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 MED25Q71SY5 747 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 ZNF563Q8TA94 476 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 SLC2A12Q8TD20 617 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 ADAMTS18Q8TE60 1221 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 RGP1Q92546 391 aaPredicted RBP11.81□□□□□ -0.52
COL12A1-205ENST00000425443 ZDHHC12Q96GR4 267 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 OR10A4Q9H209 315 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 ZNF576Q9H609 170 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 CHRNA9Q9UGM1 479 aa11.81□□□□□ -0.52
COL12A1-205ENST00000425443 ING1Q9UK53 422 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms