RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CYB5R2Q6BCY4 276 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 GLYATQ6IB77 296 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 ANKRD16Q6P6B7 361 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 NHLRC1Q6VVB1 395 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 LINC00114Q6XXX2 140 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 NANOGNBQ7Z5D8 188 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 DEPDC4Q8N2C3 294 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 RBM15BQ8NDT2 890 aaKnown RBP11.26□□□□□ -0.61
VRK3-203ENST00000424804 OR6S1Q8NH40 331 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 TXNDC15Q96J42 360 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 PRRC1Q96M27 445 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 PRSS27Q9BQR3 290 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 PCDHAC1Q9H158 963 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 FKRPQ9H9S5 495 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 MRPL39Q9NYK5 338 aaKnown RBP11.26□□□□□ -0.61
VRK3-203ENST00000424804 B3GAT1Q9P2W7 334 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 ABCD2Q9UBJ2 740 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 SNX13Q9Y5W8 968 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 A0A096LPE4 126 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 ARPC4-TTLL3A0A0A6YYG9 625 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 A0A1W2PPZ6 126 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 TMEM129A0AVI4 362 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 M0R3G1 203 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 PLPP3O14495 311 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 TRAF3IP2O43734 574 aaPredicted RBP11.25□□□□□ -0.61
VRK3-203ENST00000424804 PIP5K1CO60331 668 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 SEC14L2O76054 403 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 FAM107AO95990 144 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 USF1P22415 310 aaPredicted RBP11.25□□□□□ -0.61
VRK3-203ENST00000424804 IGFBP5P24593 272 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 TUBA1BP68363 451 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 TUBA4AP68366 448 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 LSM11P83369 360 aaKnown RBP eCLIP11.25□□□□□ -0.61
VRK3-203ENST00000424804 HGFACQ04756 655 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 CHRNB3Q05901 458 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 ST3GAL3Q11203 375 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 CAMK2DQ13557 499 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 MELKQ14680 651 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 ADIPOQQ15848 244 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 KRTAP24-1Q3LI83 254 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 C16orf89Q6UX73 402 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 TUBA1AQ71U36 451 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 CBLL1Q75N03 491 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 WDFY1Q8IWB7 410 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 DEFB107AQ8IZN7 70 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 PGAM4Q8N0Y7 254 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 SCAIQ8N9R8 606 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 ADPRHL1Q8NDY3 354 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 PIK3C3Q8NEB9 887 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 OR6N1Q8NGY5 312 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 MAGEE2Q8TD90 523 aaPredicted RBP11.25□□□□□ -0.61
VRK3-203ENST00000424804 TMEM239Q8WW34 195 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 GEMIN6Q8WXD5 167 aaKnown RBP11.25□□□□□ -0.61
VRK3-203ENST00000424804 FBXO17Q96EF6 278 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 ZNF837Q96EG3 531 aaPredicted RBP11.25□□□□□ -0.61
VRK3-203ENST00000424804 SGTBQ96EQ0 304 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 SLC38A2Q96QD8 506 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 KCNK17Q96T54 332 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 CDRT15Q96T59 188 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 SOX7Q9BT81 388 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 FNDC11Q9BVV2 318 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 LINC00470Q9BZP3 86 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 OBP2BQ9NPH6 170 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 MEPEQ9NQ76 525 aaPredicted RBP11.25□□□□□ -0.61
VRK3-203ENST00000424804 RPS6KA6Q9UK32 745 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 CDC42EP3Q9UKI2 254 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 RCE1Q9Y256 329 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 MED31Q9Y3C7 131 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 NOX1Q9Y5S8 564 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 PMF1-BGLAPU3KQ54 211 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
VRK3-203ENST00000424804 IGHV4-61A0A0C4DH41 118 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 OR6C65A6NJZ3 312 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 RPL36A-HNRNPH2H7BZ11 118 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 WNT11O96014 354 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 MT-ND1P03886 318 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 CECR9P0C854 216 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 IFI30P13284 250 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 IFNGR1P15260 489 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 ZNF16P17020 682 aaPredicted RBP11.24□□□□□ -0.61
VRK3-203ENST00000424804 FUT1P19526 365 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 RBM34P42696 430 aaKnown RBP11.24□□□□□ -0.61
VRK3-203ENST00000424804 NR4A2P43354 598 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 CAPZA2P47755 286 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 BIDP55957 195 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 UBE2NP61088 152 aaKnown RBP11.24□□□□□ -0.61
VRK3-203ENST00000424804 NAAAQ02083 359 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 CEACAM16Q2WEN9 425 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 C3orf36Q3SXR2 165 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 CYP4Z1Q86W10 505 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 MEX3DQ86XN8 651 aaKnown RBP11.24□□□□□ -0.61
VRK3-203ENST00000424804 FITM2Q8N6M3 262 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 ANKS4BQ8N8V4 417 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 TMEM158Q8WZ71 300 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 MSI2Q96DH6 328 aaKnown RBP11.24□□□□□ -0.61
VRK3-203ENST00000424804 FOXN4Q96NZ1 517 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 OR2M2Q96R28 347 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 KATNB1Q9BVA0 655 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 SLC19A3Q9BZV2 496 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 POLR2J2Q9GZM3 115 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms