RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 GMNNO75496 209 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 PDE5AO76074 875 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
USB1-202ENST00000423271 CBR1P16152 277 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 CAPZA2P47755 286 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 EFNA4P52798 201 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 CBX1P83916 185 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 HGFACQ04756 655 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 NPRL3Q12980 569 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 BNIP1Q12981 228 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 CAMK2DQ13557 499 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 ADIPOQQ15848 244 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 C3orf36Q3SXR2 165 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 SPATS1Q496A3 300 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 MDP1Q86V88 176 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 ARHGAP24Q8N264 748 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 FAM169BQ8N8A8 192 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 OR5J2Q8NH18 312 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 ADAMTS16Q8TE57 1224 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 NANOS1Q8WY41 292 aaKnown RBP13.18□□□□□ -0.3
USB1-202ENST00000423271 SLC7A6OSQ96CW6 309 aaPredicted RBP13.18□□□□□ -0.3
USB1-202ENST00000423271 CLPTM1LQ96KA5 538 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 SORCS2Q96PQ0 1159 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 GORASP2Q9H8Y8 452 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 NOX3Q9HBY0 568 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 SLC7A7Q9UM01 511 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 NOX1Q9Y5S8 564 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 SNX13Q9Y5W8 968 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 PMF1-BGLAPU3KQ54 211 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 CUBNO60494 3623 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 ATRQ13535 2644 aa13.18□□□□□ -0.3
USB1-202ENST00000423271 RTTNQ86VV8 2226 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 TRAPPC13A5PLN9 417 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 C11orf98E9PRG8 122 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 KPNA4O00629 521 aaPredicted RBP13.17□□□□□ -0.3
USB1-202ENST00000423271 CRLF1O75462 422 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 CH25HO95992 272 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 MT-ATP6P00846 226 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 TP53P04637 393 aaPredicted RBP13.17□□□□□ -0.3
USB1-202ENST00000423271 OR4A8P0C604 315 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 ADORA3P0DMS8 318 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 BMP4P12644 408 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 AHCYP23526 432 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 PAX7P23759 505 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 SERPINF1P36955 418 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 DSCR9P59020 149 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 SNRPD2P62316 118 aaKnown RBP13.17□□□□□ -0.3
USB1-202ENST00000423271 ZNF74Q16587 644 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 IFI44LQ53G44 452 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 FKBP9P1Q75LS8 142 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 PXKQ7Z7A4 578 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 LRRC17Q8N6Y2 441 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 FAM86B1Q8N7N1 296 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 C10orf105Q8TEF2 133 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 GEMIN6Q8WXD5 167 aaKnown RBP13.17□□□□□ -0.3
USB1-202ENST00000423271 FAM168AQ92567 244 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 NSMCE2Q96MF7 247 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 DCAF13Q9NV06 445 aaKnown RBP13.17□□□□□ -0.3
USB1-202ENST00000423271 RPS6KA6Q9UK32 745 aa13.17□□□□□ -0.3
USB1-202ENST00000423271 PRPF19Q9UMS4 504 aaKnown RBP13.17□□□□□ -0.3
USB1-202ENST00000423271 YLPM1P49750 1951 aaKnown RBP13.17□□□□□ -0.3
USB1-202ENST00000423271 IGHV2OR16-5A0A0B4J2B6 119 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 ZNF726A6NNF4 738 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 HLA-HP01893 362 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 IFNW1P05000 195 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 IFNGR1P15260 489 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 B4GALT1P15291 398 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 BIDP55957 195 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 DNAL1Q4LDG9 190 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 TTC33Q6PID6 262 aaPredicted RBP13.16□□□□□ -0.3
USB1-202ENST00000423271 OR4F15Q8NGB8 312 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 OR6N1Q8NGY5 312 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 LRR1Q96L50 414 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 PRSS27Q9BQR3 290 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 ZNF426Q9BUY5 554 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 ULBP2Q9BZM5 246 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 MOV10Q9HCE1 1003 aaKnown RBP13.16□□□□□ -0.3
USB1-202ENST00000423271 YAE1D1Q9NRH1 226 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 B3GNT2Q9NY97 397 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 SAMD4AQ9UPU9 718 aaKnown RBP13.16□□□□□ -0.3
USB1-202ENST00000423271 V9GYQ6 96 aa13.16□□□□□ -0.3
USB1-202ENST00000423271 GYG2O15488 501 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 OR5F1O95221 314 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
USB1-202ENST00000423271 SLC25A16P16260 332 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 ATP6V1B2P21281 511 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 THBS4P35443 961 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 ARR3P36575 388 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 YAP1P46937 504 aaKnown RBP13.15□□□□□ -0.3
USB1-202ENST00000423271 CSNK1A1P48729 337 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 TAS2R41P59536 307 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 LOXL1Q08397 574 aaPredicted RBP13.15□□□□□ -0.3
USB1-202ENST00000423271 PIN1Q13526 163 aaPredicted RBP13.15□□□□□ -0.3
USB1-202ENST00000423271 MELKQ14680 651 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 EFNB3Q15768 340 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 TMEM249Q2WGJ8 235 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 CYP2R1Q6VVX0 501 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 ZNF813Q6ZN06 617 aa13.15□□□□□ -0.3
USB1-202ENST00000423271 SLC46A3Q7Z3Q1 461 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms