RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 TSPAN32Q96QS1 320 aa8.01□□□□□ -1.13
HPS4-204ENST00000422379 GPX7Q96SL4 187 aaPredicted RBP8.01□□□□□ -1.13
HPS4-204ENST00000422379 IFT27Q9BW83 186 aa8.01□□□□□ -1.13
HPS4-204ENST00000422379 RACGAP1Q9H0H5 632 aa8.01□□□□□ -1.13
HPS4-204ENST00000422379 MED20Q9H944 212 aa8.01□□□□□ -1.13
HPS4-204ENST00000422379 ZMIZ1Q9ULJ6 1067 aa8.01□□□□□ -1.13
HPS4-204ENST00000422379 CORINQ9Y5Q5 1042 aa8.01□□□□□ -1.13
HPS4-204ENST00000422379 IER3IP1Q9Y5U9 82 aa8.01□□□□□ -1.13
HPS4-204ENST00000422379 TMEM129A0AVI4 362 aa8□□□□□ -1.13
HPS4-204ENST00000422379 HTR3EA5X5Y0 456 aa8□□□□□ -1.13
HPS4-204ENST00000422379 EIF1AYO14602 144 aaKnown RBP8□□□□□ -1.13
HPS4-204ENST00000422379 SMAD9O15198 467 aaKnown RBP8□□□□□ -1.13
HPS4-204ENST00000422379 GPX5O75715 221 aa8□□□□□ -1.13
HPS4-204ENST00000422379 SERPINI2O75830 405 aa8□□□□□ -1.13
HPS4-204ENST00000422379 LIMS3P0CW19 117 aa8□□□□□ -1.13
HPS4-204ENST00000422379 LIMS4P0CW20 117 aa8□□□□□ -1.13
HPS4-204ENST00000422379 HIST1H1CP16403 213 aaKnown RBP8□□□□□ -1.13
HPS4-204ENST00000422379 ZNF708P17019 499 aa8□□□□□ -1.13
HPS4-204ENST00000422379 POU3F2P20265 443 aaPredicted RBP8□□□□□ -1.13
HPS4-204ENST00000422379 NTF4P34130 210 aa8□□□□□ -1.13
HPS4-204ENST00000422379 WNT4P56705 351 aa8□□□□□ -1.13
HPS4-204ENST00000422379 OR2B6P58173 313 aa8□□□□□ -1.13
HPS4-204ENST00000422379 TUBA1BP68363 451 aa8□□□□□ -1.13
HPS4-204ENST00000422379 FOXK2Q01167 660 aa8□□□□□ -1.13
HPS4-204ENST00000422379 SLC10A1Q14973 349 aa8□□□□□ -1.13
HPS4-204ENST00000422379 TIMM50Q3ZCQ8 353 aa8□□□□□ -1.13
HPS4-204ENST00000422379 PRR30Q53SZ7 412 aaPredicted RBP8□□□□□ -1.13
HPS4-204ENST00000422379 ALG10Q5BKT4 473 aa8□□□□□ -1.13
HPS4-204ENST00000422379 NIPAL3Q6P499 406 aa8□□□□□ -1.13
HPS4-204ENST00000422379 PLBD1Q6P4A8 553 aa8□□□□□ -1.13
HPS4-204ENST00000422379 C5orf46Q6UWT4 87 aa8□□□□□ -1.13
HPS4-204ENST00000422379 LINC00299Q6ZSB3 139 aa8□□□□□ -1.13
HPS4-204ENST00000422379 TUBA1AQ71U36 451 aa8□□□□□ -1.13
HPS4-204ENST00000422379 CROCCP3Q8IVE0 287 aa8□□□□□ -1.13
HPS4-204ENST00000422379 GHDCQ8N2G8 530 aa8□□□□□ -1.13
HPS4-204ENST00000422379 CYB561A3Q8NBI2 242 aa8□□□□□ -1.13
HPS4-204ENST00000422379 KBTBD8Q8NFY9 601 aa8□□□□□ -1.13
HPS4-204ENST00000422379 OR4F15Q8NGB8 312 aa8□□□□□ -1.13
HPS4-204ENST00000422379 OR10D3Q8NH80 312 aa8□□□□□ -1.13
HPS4-204ENST00000422379 NEIL3Q8TAT5 605 aa8□□□□□ -1.13
HPS4-204ENST00000422379 ZNRF4Q8WWF5 429 aa8□□□□□ -1.13
HPS4-204ENST00000422379 TM9SF4Q92544 642 aa8□□□□□ -1.13
HPS4-204ENST00000422379 OTULINQ96BN8 352 aa8□□□□□ -1.13
HPS4-204ENST00000422379 DDOQ99489 341 aa8□□□□□ -1.13
HPS4-204ENST00000422379 FN3KQ9H479 309 aa8□□□□□ -1.13
HPS4-204ENST00000422379 AKIP1Q9NQ31 210 aa8□□□□□ -1.13
HPS4-204ENST00000422379 CMC2Q9NRP2 79 aa8□□□□□ -1.13
HPS4-204ENST00000422379 NDUFB11Q9NX14 153 aa8□□□□□ -1.13
HPS4-204ENST00000422379 ALKBH4Q9NXW9 302 aa8□□□□□ -1.13
HPS4-204ENST00000422379 EXOSC1Q9Y3B2 195 aaKnown RBP8□□□□□ -1.13
HPS4-204ENST00000422379 HDGFL3Q9Y3E1 203 aa8□□□□□ -1.13
HPS4-204ENST00000422379 TEX13CA0A0J9YWL9 993 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 METTL15A6NJ78 407 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 NPIPA5E9PKD4 350 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 C3orf80F5H4A9 247 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 H7C1C5 153 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 SULT2B1O00204 365 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 TFECO14948 347 aaPredicted RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 OR2T1O43869 369 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 CXCL13O43927 109 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 PMS2P2O95744 297 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 IGHG3P01860 377 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 CLUP10909 449 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 CD79BP40259 229 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 CTXN1P60606 82 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 LCN6P62502 163 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 SRYQ05066 204 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 CRMP1Q14194 572 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 ACKR1Q16570 336 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.99□□□□□ -1.13
HPS4-204ENST00000422379 MESTQ5EB52 335 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 LIPKQ5VXJ0 399 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 VASNQ6EMK4 673 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 B3GLCTQ6Y288 498 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 DPY19L2P2Q6ZN68 376 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 H1FNTQ75WM6 255 aaPredicted RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 GID4Q8IVV7 300 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 PHC2Q8IXK0 858 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 SCAIQ8N9R8 606 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 OR6Q1Q8NGQ2 317 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 PTP4A1Q93096 173 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 TRMT61AQ96FX7 289 aaKnown RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 TXNDC15Q96J42 360 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 ERMAPQ96PL5 475 aaPredicted RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 TIMP4Q99727 224 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 CHST11Q9NPF2 352 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 CHCHD3Q9NX63 227 aaKnown RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 QPCTLQ9NXS2 382 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 KLHL13Q9P2N7 655 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 ING1Q9UK53 422 aaPredicted RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 ZNF346Q9UL40 294 aaKnown RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 NPIPA1Q9UND3 350 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 TRAPPC4Q9Y296 219 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 EXOGQ9Y2C4 368 aaKnown RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 SPIN1Q9Y657 262 aaPredicted RBP7.99□□□□□ -1.13
HPS4-204ENST00000422379 SVILO95425 2214 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 ADGRG4Q8IZF6 3080 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 KIAA1549Q9HCM3 1950 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 TRGV5A0A0B4J1U4 118 aa7.99□□□□□ -1.13
HPS4-204ENST00000422379 AQP7P3A6NL99 342 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms