RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 GPA33Q99795 319 aa12.65□□□□□ -0.38
PTPN18-204ENST00000420717 CHID1Q9BWS9 393 aa12.65□□□□□ -0.38
PTPN18-204ENST00000420717 NDEL1Q9GZM8 345 aa12.65□□□□□ -0.38
PTPN18-204ENST00000420717 CLEC4MQ9H2X3 399 aaPredicted RBP12.65□□□□□ -0.38
PTPN18-204ENST00000420717 CRLF2Q9HC73 371 aa12.65□□□□□ -0.38
PTPN18-204ENST00000420717 CCM2LQ9NUG4 571 aaPredicted RBP12.65□□□□□ -0.38
PTPN18-204ENST00000420717 VNN3Q9NY84 501 aa12.65□□□□□ -0.38
PTPN18-204ENST00000420717 TMCC3Q9ULS5 477 aa12.65□□□□□ -0.38
PTPN18-204ENST00000420717 MAGED1Q9Y5V3 778 aaPredicted RBP12.65□□□□□ -0.38
PTPN18-204ENST00000420717 CSMD2Q7Z408 3487 aa12.65□□□□□ -0.38
PTPN18-204ENST00000420717 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.64□□□□□ -0.39
PTPN18-204ENST00000420717 A0A1W2PPR1 153 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 CIB4A0PJX0 185 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 TNFRSF11BO00300 401 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 AHCYL1O43865 530 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 KRT33AO76009 404 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 NDUFB2O95178 105 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 CD14P08571 375 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 NR2C1P13056 603 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 APEHP13798 732 aaKnown RBP12.64□□□□□ -0.39
PTPN18-204ENST00000420717 KRTAP10-9P60411 292 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
PTPN18-204ENST00000420717 TSPAN31Q12999 210 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 CAMK2DQ13557 499 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 MELKQ14680 651 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 LAPTM4AQ15012 233 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 CEACAM16Q2WEN9 425 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 TBRG1Q3YBR2 411 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 CCDC36Q8IYA8 594 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 OR51A7Q8NH64 312 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 FNDC8Q8TC99 324 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 UTP4Q969X6 686 aaKnown RBP12.64□□□□□ -0.39
PTPN18-204ENST00000420717 SLCO4A1Q96BD0 722 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 MUCL1Q96DR8 90 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 TNFRSF13CQ96RJ3 184 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 ALG12Q9BV10 488 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 ULBP2Q9BZM5 246 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 YY1AP1Q9H869 796 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 REEP1Q9H902 201 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 NRIP3Q9NQ35 241 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 GLTPQ9NZD2 209 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 NPAP1Q9NZP6 1156 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
PTPN18-204ENST00000420717 CRNNQ9UBG3 495 aaPredicted RBP12.64□□□□□ -0.39
PTPN18-204ENST00000420717 CSMD1Q96PZ7 3565 aa12.64□□□□□ -0.39
PTPN18-204ENST00000420717 UNC119BA6NIH7 251 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 A6NIZ1 184 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 MCIDASD6RGH6 385 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 OR10H3O60404 316 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 FKBP6O75344 327 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 SERPINI2O75830 405 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 TXNDC12O95881 172 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 ACADSP16219 412 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 RAP1BP61224 184 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 RAP1AP62834 184 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 CBX1P83916 185 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 RUNX1T1Q06455 604 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 NCMAPQ5T1S8 102 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 ADAM5Q6NVV9 412 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 LRFN4Q6PJG9 635 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 ZNF620Q6ZNG0 422 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 YTHDF3Q7Z739 585 aaKnown RBP12.63□□□□□ -0.39
PTPN18-204ENST00000420717 TMEM200AQ86VY9 491 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 SPATA24Q86W54 205 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 MEX3DQ86XN8 651 aaKnown RBP12.63□□□□□ -0.39
PTPN18-204ENST00000420717 CDC20BQ86Y33 519 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 WFDC8Q8IUA0 241 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 CLDN22Q8N7P3 220 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 ZNF837Q96EG3 531 aaPredicted RBP12.63□□□□□ -0.39
PTPN18-204ENST00000420717 ZC3HAV1LQ96H79 300 aaKnown RBP12.63□□□□□ -0.39
PTPN18-204ENST00000420717 TSPAN32Q96QS1 320 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 DGCR6LQ9BY27 220 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 POLDIP3Q9BY77 421 aaKnown RBP12.63□□□□□ -0.39
PTPN18-204ENST00000420717 PLEKHF2Q9H8W4 249 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 AURKCQ9UQB9 309 aa12.63□□□□□ -0.39
PTPN18-204ENST00000420717 SAMHD1Q9Y3Z3 626 aaKnown RBP12.63□□□□□ -0.39
PTPN18-204ENST00000420717 SPG11Q96JI7 2443 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 M0R3G1 203 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 ARPC3O15145 178 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 MGRN1O60291 552 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 TRMUO75648 421 aaKnown RBP12.62□□□□□ -0.39
PTPN18-204ENST00000420717 WNT11O96014 354 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 HOXC12P31275 282 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 CTXN1P60606 82 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 ARF1P84077 181 aaKnown RBP12.62□□□□□ -0.39
PTPN18-204ENST00000420717 FOXD4Q12950 439 aaPredicted RBP12.62□□□□□ -0.39
PTPN18-204ENST00000420717 MICAQ29983 383 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 HIKESHIQ53FT3 197 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 CARD17Q5XLA6 110 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 GPR139Q6DWJ6 353 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 RPL13AP3Q6NVV1 102 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 SMARCD3Q6STE5 483 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 CD300LDQ6UXZ3 194 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 THSD4Q6ZMP0 1018 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 DPY19L2P2Q6ZN68 376 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 ARIH2OSQ8N7S6 290 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 OR6N1Q8NGY5 312 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 FANK1Q8TC84 345 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 GNPDA2Q8TDQ7 276 aa12.62□□□□□ -0.39
PTPN18-204ENST00000420717 HDAC2Q92769 488 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms