RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SFXN2Q96NB2 322 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 TSPAN32Q96QS1 320 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 POMT2Q9UKY4 750 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 SPAG17Q6Q759 2223 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 NUPL2O15504 423 aaKnown RBP10.8□□□□□ -0.68
LIMK1-202ENST00000418310 ICOSLGO75144 302 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 PPM1BO75688 479 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 IFNA7P01567 189 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 IGHV4-34P06331 123 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 GTF2F2P13984 249 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 FZD2Q14332 565 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 OPCMLQ14982 345 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 ZNF141Q15928 474 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 WDR45BQ5MNZ6 344 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 C1orf189Q5VU69 101 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 B3GNTL1Q67FW5 361 aaPredicted RBP10.8□□□□□ -0.68
LIMK1-202ENST00000418310 GRAMD2AQ8IUY3 354 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 TMEM151BQ8IW70 566 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 LMX1AQ8TE12 382 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 TAAR8Q969N4 342 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 SORCS2Q96PQ0 1159 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 SLC38A3Q99624 504 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 MMP25Q9NPA2 562 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 DZANK1Q9NVP4 752 aa10.8□□□□□ -0.68
LIMK1-202ENST00000418310 PCNX3Q9H6A9 2034 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 SIGLEC5O15389 551 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 UPK3AO75631 287 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 OR6A2O95222 327 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 WNT11O96014 354 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 NAT1P18440 290 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 CXCL2P19875 107 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 PRPS1P60891 318 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 SIGLEC14Q08ET2 396 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 DEFB133Q30KQ1 61 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 TMEM184AQ6ZMB5 413 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 ZNF627Q7L945 461 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 DND1Q8IYX4 353 aaKnown RBP10.79□□□□□ -0.68
LIMK1-202ENST00000418310 GPBAR1Q8TDU6 330 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 MED30Q96HR3 178 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 OR11A1Q9GZK7 315 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 CGGBP1Q9UFW8 167 aaPredicted RBP10.79□□□□□ -0.68
LIMK1-202ENST00000418310 IGHV5-51A0A0C4DH38 117 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 DCDC2BA2VCK2 349 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 EFCAB7A8K855 629 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 EIF1AYO14602 144 aaKnown RBP10.79□□□□□ -0.68
LIMK1-202ENST00000418310 GOSR2O14653 212 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 GPRIN2O60269 458 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 CREBL2O60519 120 aaPredicted RBP10.79□□□□□ -0.68
LIMK1-202ENST00000418310 MPZL1O95297 269 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 UTS2O95399 124 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 NR0B1P51843 470 aaKnown RBP10.79□□□□□ -0.68
LIMK1-202ENST00000418310 DYRK1AQ13627 763 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 KIF26BQ2KJY2 2108 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 COL28A1Q2UY09 1125 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 NDUFAF7Q7L592 441 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 OR4C16Q8NGL9 310 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 OR2G2Q8NGZ5 317 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 TNFAIP8L1Q8WVP5 186 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 RNF166Q96A37 237 aaPredicted RBP10.79□□□□□ -0.68
LIMK1-202ENST00000418310 MRPL48Q96GC5 212 aaKnown RBP10.79□□□□□ -0.68
LIMK1-202ENST00000418310 PCDH15Q96QU1 1955 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 LRRC61Q9BV99 259 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 CHST6Q9GZX3 395 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 ELOVL3Q9HB03 270 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 NPIPB9F8W1W9 429 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 LGALS8O00214 317 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 TNFRSF10CO14798 259 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 TACSTD2P09758 323 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 ZNF35P13682 527 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 SDHAP31040 664 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 EIF1AXP47813 144 aaKnown RBP10.79□□□□□ -0.68
LIMK1-202ENST00000418310 LBX1P52954 281 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 LRRC37A5PQ49AS3 106 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 WBP2NLQ6ICG8 309 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 TMEM205Q6UW68 189 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 OR51S1Q8NGJ8 323 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 MESP1Q9BRJ9 268 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 COMMD4Q9H0A8 199 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 POLE3Q9NRF9 147 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 MAB21L2Q9Y586 359 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 CLDN16Q9Y5I7 305 aa10.79□□□□□ -0.68
LIMK1-202ENST00000418310 FRYLO94915 3013 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 A0A1W2PPL8 197 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 RPS10-NUDT3A0A1W2PQS6 291 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 M0QYG6 137 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 TSPAN4O14817 238 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 ZNF264O43296 627 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 SLC16A7O60669 478 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 OPN1LWP04000 364 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 VSIG10L2P0DP72 767 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 APEHP13798 732 aaKnown RBP10.78□□□□□ -0.68
LIMK1-202ENST00000418310 POU3F4P49335 361 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 AP3S2P59780 193 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 GGTLC2Q14390 218 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 C4orf46Q504U0 113 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 VWA2Q5GFL6 755 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 DMRTC1Q5HYR2 192 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 WDR38Q5JTN6 314 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 METTL11BQ5VVY1 283 aa10.78□□□□□ -0.68
LIMK1-202ENST00000418310 C17orf107Q6ZR85 190 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms