RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 CPN1P15169 458 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 IFNGR1P15260 489 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 EDNRAP25101 427 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 ACVR2AP27037 513 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 RPL4P36578 427 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 SLC25A1P53007 311 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 SLC16A1P53985 500 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 GABARAPL2P60520 117 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 RAC3P60763 192 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 RPL27P61353 136 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 POU3F1Q03052 451 aaPredicted RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 MELKQ14680 651 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 SLC17A1Q14916 467 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 SLC10A1Q14973 349 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 ST3GAL2Q16842 350 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 EMC4Q5J8M3 183 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 RBM48Q5RL73 367 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 NXNL2Q5VZ03 156 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 HBMQ6B0K9 141 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 PLBD1Q6P4A8 553 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 CASP12Q6UXS9 341 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 B3GLCTQ6Y288 498 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 SLC35D2Q76EJ3 337 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 CXXC5Q7LFL8 322 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 UBQLNLQ8IYU4 475 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 TMEM123Q8N131 208 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 GHDCQ8N2G8 530 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 ARIH2OSQ8N7S6 290 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 OR9K2Q8NGE7 335 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 OR52E2Q8NGJ4 325 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 OR9Q1Q8NGQ5 310 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 C9orf43Q8TAL5 461 aaPredicted RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 RNF128Q8TEB7 428 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 ROBO4Q8WZ75 1007 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 ABTB1Q969K4 478 aaPredicted RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 WBP1Q96G27 269 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 OXGR1Q96P68 337 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 ZNF385AQ96PM9 386 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 SLC38A2Q96QD8 506 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 SNX18Q96RF0 628 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 NMNAT3Q96T66 252 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 TUBA1CQ9BQE3 449 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 MRPL13Q9BYD1 178 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 YTHDF1Q9BYJ9 559 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 PRDM14Q9GZV8 571 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 ZNF71Q9NQZ8 489 aaPredicted RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 MRPS18AQ9NVS2 196 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 IMPAD1Q9NX62 359 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 TAS2R16Q9NYV7 291 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 VSX1Q9NZR4 365 aaPredicted RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 ERVK-18Q9QC07 812 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 NPIPA1Q9UND3 350 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 MYRFQ9Y2G1 1151 aa6.08□□□□□ -1.44
CPS1-202ENST00000417946 PRRC2CQ9Y520 2896 aaKnown RBP6.08□□□□□ -1.44
CPS1-202ENST00000417946 INTS1Q8N201 2190 aaKnown RBP6.07□□□□□ -1.44
CPS1-202ENST00000417946 IGKV3D-15A0A087WSY6 115 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 SLC22A23A1A5C7 686 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PRSS37A4D1T9 235 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 SH3D21A4FU49 640 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 MAGEA13PA6NCF6 341 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 GJE1A6NN92 205 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 RIIAD1A6NNX1 92 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PRR32B1ATL7 298 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PRODHO43272 600 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 RNF13O43567 381 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 CYTIPO60759 359 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 FAM20BO75063 409 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 SERPINI2O75830 405 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 APOL3O95236 402 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 TNFAIP8O95379 198 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 TFP02787 698 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 MT-ND2P03891 347 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 HIST1H2ABP04908 130 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 GYPBP06028 91 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PGA4P0DJD7 388 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PGA3P0DJD8 388 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 SFTPCP11686 197 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PIPP12273 146 aaPredicted RBP6.07□□□□□ -1.44
CPS1-202ENST00000417946 CTLA4P16410 223 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 SPI1P17947 270 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PCMT1P22061 227 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 AHCYP23526 432 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 HTR1FP30939 366 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PTGS2P35354 604 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 ACVR1BP36896 505 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 CD79BP40259 229 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 EIF1AXP47813 144 aaKnown RBP6.07□□□□□ -1.44
CPS1-202ENST00000417946 ZNF133P52736 654 aaPredicted RBP6.07□□□□□ -1.44
CPS1-202ENST00000417946 CARD18P57730 90 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 CSNK2A1P68400 391 aaPredicted RBP6.07□□□□□ -1.44
CPS1-202ENST00000417946 FMODQ06828 376 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 LGALS3BPQ08380 585 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 BLMHQ13867 455 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 GGTLC2Q14390 218 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 GUSBP1Q15486 140 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 HIST3H3Q16695 136 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 PHYHD1Q5SRE7 291 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 EEF1A1P5Q5VTE0 462 aa6.07□□□□□ -1.44
CPS1-202ENST00000417946 MEDAGQ5VYS4 303 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms