RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ZNF613Q6PF04 617 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 PIWIL3Q7Z3Z3 882 aaKnown RBP12.42□□□□□ -0.42
PAF1-202ENST00000416728 C11orf65Q8NCR3 313 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 C1orf159Q96HA4 380 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 CPPED1Q9BRF8 314 aaPredicted RBP12.42□□□□□ -0.42
PAF1-202ENST00000416728 B4DSR2 109 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 CHP2O43745 196 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 ENTPD5O75356 428 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
PAF1-202ENST00000416728 DVL1P1P54792 670 aaPredicted RBP12.41□□□□□ -0.42
PAF1-202ENST00000416728 PCBP3P57721 371 aaKnown RBP12.41□□□□□ -0.42
PAF1-202ENST00000416728 RAB39AQ14964 217 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
PAF1-202ENST00000416728 FXNQ16595 210 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 CYP51A1Q16850 503 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 ELFN2Q5R3F8 820 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 RINLQ6ZS11 566 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 SLC35D2Q76EJ3 337 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 OR6X1Q8NH79 312 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 RDH5Q92781 318 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 GLTPQ9NZD2 209 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 SLC7A8Q9UHI5 535 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 FZR1Q9UM11 496 aa12.41□□□□□ -0.42
PAF1-202ENST00000416728 A0A1W2PPW3 197 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 CPSF4LA6NMK7 179 aaKnown RBP12.4□□□□□ -0.42
PAF1-202ENST00000416728 HPXP02790 462 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 OPN1SWP03999 348 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 SERPINA5P05154 406 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 PATE4P0C8F1 98 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 ACHEP22303 614 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 SEC24CP53992 1094 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 RBBP4Q09028 425 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 ZNF74Q16587 644 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 DUSP7Q16829 419 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 RUNDC3AQ59EK9 446 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 ENTPD8Q5MY95 495 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 BEND6Q5SZJ8 279 aaPredicted RBP12.4□□□□□ -0.42
PAF1-202ENST00000416728 AGBL2Q5U5Z8 902 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 DLEU7Q6UYE1 221 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 GLCCI1Q86VQ1 547 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 LRP11Q86VZ4 500 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 PTOV1Q86YD1 416 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 SKA3Q8IX90 412 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 OR6T1Q8NGN1 323 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 TMEM54Q969K7 222 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 ZNF566Q969W8 418 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 ARHGDIGQ99819 225 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 RABEP2Q9H5N1 569 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 NANSQ9NR45 359 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 MYEF2Q9P2K5 600 aaKnown RBP12.4□□□□□ -0.42
PAF1-202ENST00000416728 DUSP13Q9UII6 198 aa12.4□□□□□ -0.42
PAF1-202ENST00000416728 LEF1Q9UJU2 399 aaPredicted RBP12.4□□□□□ -0.42
PAF1-202ENST00000416728 ZNF346Q9UL40 294 aaKnown RBP12.4□□□□□ -0.42
PAF1-202ENST00000416728 M0QX08 132 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 RNF13O43567 381 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 FARS2O95363 451 aaKnown RBP12.39□□□□□ -0.43
PAF1-202ENST00000416728 CH25HO95992 272 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 OR8G3PP0DMU2 310 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 SAGP10523 405 aaPredicted RBP12.39□□□□□ -0.43
PAF1-202ENST00000416728 ITGA2P17301 1181 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 NPTX1Q15818 432 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 TTC33Q6PID6 262 aaPredicted RBP12.39□□□□□ -0.43
PAF1-202ENST00000416728 WDR88Q6ZMY6 472 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 DHDDSQ86SQ9 333 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 ZNF584Q8IVC4 421 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 SLC22A24Q8N4F4 322 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 GPR32P1Q8NGA4 272 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 CLDND2Q8NHS1 167 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 FGFBP3Q8TAT2 258 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 ADAMTS16Q8TE57 1224 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 SLC25A44Q96H78 314 aaPredicted RBP12.39□□□□□ -0.43
PAF1-202ENST00000416728 NARFLQ9H6Q4 476 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 METRNQ9UJH8 293 aa12.39□□□□□ -0.43
PAF1-202ENST00000416728 KPNA4O00629 521 aaPredicted RBP12.38□□□□□ -0.43
PAF1-202ENST00000416728 TFP02787 698 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 HIST1H2ABP04908 130 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 NAT2P11245 290 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 COL8A2P25067 703 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 TMEM33P57088 247 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 MTPNP58546 118 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 SELENOVP59797 346 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 MRPS11P82912 194 aaKnown RBP12.38□□□□□ -0.43
PAF1-202ENST00000416728 ZP4Q12836 540 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 MELKQ14680 651 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 NKPD1Q17RQ9 610 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 RGS7BPQ6MZT1 257 aaPredicted RBP12.38□□□□□ -0.43
PAF1-202ENST00000416728 HIST3H2AQ7L7L0 130 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 CARM1Q86X55 608 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 SLC30A7Q8NEW0 376 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
PAF1-202ENST00000416728 DYDC1Q8WWB3 177 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 HIST1H2ACQ93077 130 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 SH3GL3Q99963 347 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 ZNF385DQ9H6B1 395 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 ZNF275Q9NSD4 429 aaPredicted RBP12.38□□□□□ -0.43
PAF1-202ENST00000416728 TMEM38BQ9NVV0 291 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 TAS2R5Q9NYW4 299 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 SLC7A7Q9UM01 511 aa12.38□□□□□ -0.43
PAF1-202ENST00000416728 NDUFAF1Q9Y375 327 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms