RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SPIN4Q56A73 249 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 ACTL10Q5JWF8 245 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 DCST2Q5T1A1 773 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 PRR5LQ6MZQ0 368 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 FAHD2BQ6P2I3 314 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 FAM199XQ6PEV8 388 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SLC23A3Q6PIS1 610 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 LCLAT1Q6UWP7 414 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 CCNI2Q6ZMN8 369 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 Q6ZSR9 355 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SLC25A48Q6ZT89 311 aaKnown RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 Q75L30 129 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 HSD11B1LQ7Z5J1 315 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF561Q8N587 486 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 GBGT1Q8N5D6 347 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SLC16A11Q8NCK7 471 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 VN1R2Q8NFZ6 395 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 OR11H4Q8NGC9 324 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 OR9Q2Q8NGE9 314 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 OR1B1Q8NGR6 318 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 OR5K2Q8NHB8 316 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 FGFBP3Q8TAT2 258 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 ABHD4Q8TB40 342 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SYNPRQ8TBG9 265 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SFXN5Q8TD22 340 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 DOK4Q8TEW6 326 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 C16orf78Q8WTQ4 265 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SLC25A43Q8WUT9 341 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 OR8D1Q8WZ84 308 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 NEIL2Q969S2 332 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 RERGQ96A58 199 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 TESCQ96BS2 214 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 FLYWCH2Q96CP2 140 aaKnown RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SMIM19Q96E16 107 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 ZHX1-C8orf76Q96EF9 292 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 FAHD2AQ96GK7 314 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SFRP2Q96HF1 295 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 KCTD7Q96MP8 289 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 GFM1Q96RP9 751 aaKnown RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 TSNAXQ99598 290 aaKnown RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SLC38A3Q99624 504 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SDHCQ99643 169 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 APOL4Q9BPW4 351 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 APOOQ9BUR5 198 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 RAB6CQ9H0N0 254 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF430Q9H8G1 570 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 RDH14Q9HBH5 336 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 TMEM27Q9HBJ8 222 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 PARD6AQ9NPB6 346 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 UBE2TQ9NPD8 197 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 RRAGDQ9NQL2 400 aaPredicted RBP2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SPANXA1Q9NS26 97 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 HRASLS2Q9NWW9 162 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 SIGLEC8Q9NYZ4 499 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 TREM2Q9NZC2 230 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF391Q9UJN7 358 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 FBXL4Q9UKA2 621 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 STUB1Q9UNE7 303 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 LAMP3Q9UQV4 416 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 OARD1Q9Y530 152 aa2.75□□□□□ -1.97
CTDSPL-203ENST00000416688 FLT4P35916 1363 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 NID2Q14112 1375 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 PCDH11XQ9BZA7 1347 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 SYNJ2O15056 1496 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF816-ZNF321PA0A0X1KG74 233 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 KIR2DS1A0A191URI9 304 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 A0A1W2PPC1 479 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 RPS10-NUDT3A0A1W2PQS6 291 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 TVP23AA6NH52 213 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 VSTM2BA6NLU5 285 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 HACD1B0YJ81 288 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 TCP10L2B9ZVM9 353 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 PROB1E7EW31 1015 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 K7ERI5 159 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 OVOL3O00110 214 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 P2RX6O15547 441 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 CHP2O43745 196 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 CCNKO75909 580 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 LSM8O95777 96 aaKnown RBP2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 IGSF6O95976 241 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 NUDT3O95989 172 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 IGHG4P01861 327 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 HBE1P02100 147 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 CRYAAP02489 173 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 PPBPP02775 128 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 RPLP0P05388 317 aaKnown RBP2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 CRHP06850 196 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 NBEAP1P0C6P0 100 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 DAOP14920 347 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 KCNE1P15382 129 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 UGT2B7P16662 529 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF12P17014 697 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 CR2P20023 1033 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 F2RP25116 425 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 PSMA1P25786 263 aaKnown RBP2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 GDF1P27539 372 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 HOXD3P31249 432 aaPredicted RBP2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 NBL1P41271 181 aa2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 YAP1P46937 504 aaKnown RBP2.74□□□□□ -1.97
CTDSPL-203ENST00000416688 RASSF2P50749 326 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms