RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 GAL3ST3Q96A11 431 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 SLC35A4Q96G79 324 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 CDX2Q99626 313 aaPredicted RBP12.61□□□□□ -0.39
CHEK2-210ENST00000416671 CMSS1Q9BQ75 279 aaKnown RBP12.61□□□□□ -0.39
CHEK2-210ENST00000416671 MRI1Q9BV20 369 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 GNG8Q9UK08 70 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 MOKQ9UQ07 419 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 TRAV14DV4A0A0A6YYC5 116 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 MNDAP41218 407 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 KCNJ3P48549 501 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 LUMP51884 338 aaPredicted RBP12.61□□□□□ -0.39
CHEK2-210ENST00000416671 C1orf61Q13536 156 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 CCINQ13939 588 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 C4orf46Q504U0 113 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 STPG1Q5TH74 334 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 FIGLAQ6QHK4 219 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 OR5T3Q8NGG3 340 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 OR13C2Q8NGS9 318 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 OR14A16Q8NHC5 309 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 SNX33Q8WV41 574 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 TMEM239Q8WW34 195 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 CDS1Q92903 461 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 MIB2Q96AX9 1013 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 ARSGQ96EG1 525 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 MS4A4EQ96PG1 132 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 ADAT1Q9BUB4 502 aaKnown RBP12.61□□□□□ -0.39
CHEK2-210ENST00000416671 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 GPN3Q9UHW5 284 aaPredicted RBP12.61□□□□□ -0.39
CHEK2-210ENST00000416671 CA14Q9ULX7 337 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 SLCO1B1Q9Y6L6 691 aa12.61□□□□□ -0.39
CHEK2-210ENST00000416671 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 TRAV20A0A0B4J274 112 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 TRAPPC13A5PLN9 417 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 ACOD1A6NK06 481 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 CD1AP06126 327 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 FABP1P07148 127 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 CALCBP10092 127 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 NDUFS1P28331 727 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 PPIAP62937 165 aaKnown RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 TRMT12Q53H54 448 aaKnown RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 WDR88Q6ZMY6 472 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 CDK20Q8IZL9 346 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 RNF113BQ8IZP6 322 aaKnown RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 ARL14Q8N4G2 192 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 OR6N1Q8NGY5 312 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 NANPQ8TBE9 248 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 WDR13Q9H1Z4 485 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 C8orf33Q9H7E9 229 aaPredicted RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 FBRSQ9HAH7 460 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 OR10H1Q9Y4A9 318 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 CENPVL1A0A0U1RR11 272 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 OR14I1A6ND48 311 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 OR6C68A6NDL8 312 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 HCRTR1O43613 425 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 GPRIN2O60269 458 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 APBB3O95704 486 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 JMJD6Q6NYC1 403 aaPredicted RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 ZNF836Q6ZNA1 936 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 RANBP3LQ86VV4 465 aaPredicted RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 LRRC25Q8N386 305 aaPredicted RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 KCNRGQ8N5I3 272 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 OR1S2Q8NGQ3 325 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 THAP6Q8TBB0 222 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 ADAMTS15Q8TE58 950 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 ZMYND19Q96E35 227 aaPredicted RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 PHYHIPLQ96FC7 376 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 CCDC86Q9H6F5 360 aaKnown RBP12.6□□□□□ -0.39
CHEK2-210ENST00000416671 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 PCOLCE2Q9UKZ9 415 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 PCDHB10Q9UN67 800 aa12.6□□□□□ -0.39
CHEK2-210ENST00000416671 H7C417 338 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 SGCEO43556 437 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 GLSO94925 669 aaPredicted RBP12.59□□□□□ -0.39
CHEK2-210ENST00000416671 PPP1R3DO95685 299 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 CTSBP07858 339 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 OR2T7P0C7T2 308 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 PSMB10P40306 273 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 TSFMP43897 325 aaKnown RBP12.59□□□□□ -0.39
CHEK2-210ENST00000416671 ZNF136P52737 540 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 AKR1C2P52895 323 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 AKR1C1Q04828 323 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 SRSF5Q13243 272 aaKnown RBP12.59□□□□□ -0.39
CHEK2-210ENST00000416671 PAN3Q58A45 887 aaKnown RBP12.59□□□□□ -0.39
CHEK2-210ENST00000416671 ZNF600Q6ZNG1 722 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 TMEM52Q8NDY8 209 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 OR2T27Q8NH04 317 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 SLC22A18Q96BI1 424 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 ZNF75AQ96N20 296 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 ZNF471Q9BX82 626 aaPredicted RBP12.59□□□□□ -0.39
CHEK2-210ENST00000416671 APMAPQ9HDC9 416 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 MBD2Q9UBB5 411 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 MTFP1Q9UDX5 166 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 SIGLEC7Q9Y286 467 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 TRAV27A0A087WT01 109 aa12.59□□□□□ -0.39
CHEK2-210ENST00000416671 LRRC72A6NJI9 287 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms