RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SGK3Q96BR1 496 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CNRIP1Q96F85 164 aaPredicted RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CMTM3Q96MX0 182 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CPEB1Q9BZB8 566 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 UBE2CO00762 179 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CLN5O75503 358 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZFPL1O95159 310 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 HLA-AP01891 365 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 SPI1P17947 270 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 WASP42768 502 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 EFNB2P52799 333 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 F2RL1P55085 397 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR2B8PP59922 312 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 SHHQ15465 462 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 GDPD4Q6W3E5 623 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 DND1Q8IYX4 353 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 SLC16A11Q8NCK7 471 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR4E2Q8NGC2 313 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR51D1Q8NGF3 324 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR2A12Q8NGT7 310 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 PHYHIPLQ96FC7 376 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CNN2Q99439 309 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 SELENOIQ9C0D9 397 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 RPS10P5Q9NQ39 176 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR2S2Q9NQN1 319 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 NCDNQ9UBB6 729 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CTNSO60931 367 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 AMY2AP04746 511 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 ACTA2P62736 377 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 ACTG2P63267 376 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 RNF212Q495C1 297 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 NCMAPQ5T1S8 102 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 FAM46CQ5VWP2 391 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR52W1Q6IF63 320 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF425Q6IV72 752 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 STAC2Q6ZMT1 411 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 RHOUQ7L0Q8 258 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 TRAM1L1Q8N609 369 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 CASTOR1Q8WTX7 329 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 RELTQ969Z4 430 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 TNFRSF13CQ96RJ3 184 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 SEC11CQ9BY50 192 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 LAT2Q9GZY6 243 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF443Q9Y2A4 671 aaPredicted RBP13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 WDR45Q9Y484 360 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 DENND4CQ5VZ89 1909 aa13.43□□□□□ -0.26
NCKIPSD-204ENST00000416649 A0A1B0GV90 55 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 IMPA2O14732 288 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 PGAM2P15259 253 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 NANOS3P60323 173 aaKnown RBP13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 DHCR24Q15392 516 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 KLHL26Q53HC5 615 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 KCTD9Q7L273 389 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 CDS1Q92903 461 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 TCEAL7Q9BRU2 100 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 C6orf106Q9H6K1 298 aaPredicted RBP13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 ST8SIA5O15466 376 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 PMS2P2O95744 297 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 ADRA2CP18825 462 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 INPP5JQ15735 1006 aaPredicted RBP13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR4C11Q6IEV9 310 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF836Q6ZNA1 936 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 UBE3DQ7Z6J8 389 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 RHOVQ96L33 236 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 PRSS27Q9BQR3 290 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 CHRDQ9H2X0 955 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZMAT3Q9HA38 289 aaKnown RBP13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 CAPN10Q9HC96 672 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 SMCO4Q9NRQ5 59 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 ASH2LQ9UBL3 628 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 YBX2Q9Y2T7 364 aaKnown RBP13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF281Q9Y2X9 895 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 TRIOBPQ9H2D6 2365 aa13.42□□□□□ -0.26
NCKIPSD-204ENST00000416649 C13orf42A0A1B0GVH6 325 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 GXYLT2A0PJZ3 443 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 OIP5O43482 229 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 RAB3DO95716 219 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 DCNP07585 359 aaKnown RBP13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 CTSLP07711 333 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 FBP1P09467 338 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 ST6GAL1P15907 406 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 MUC1P15941 1255 aaPredicted RBP13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 ADH6P28332 368 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 SSTP61278 116 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 DHRS2Q13268 280 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF77Q15935 545 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 NKPD1Q17RQ9 610 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF793Q6ZN11 406 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR56A1Q8NGH5 318 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR5M8Q8NGP6 311 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 TCTEX1D2Q8WW35 142 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 MYADMQ96S97 322 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 NRIP2Q9BQI9 281 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 TAS2R8Q9NYW2 309 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 SIGLEC7Q9Y286 467 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 ATG4BQ9Y4P1 393 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 HEATR5BQ9P2D3 2071 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 A6NLC8 198 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 SULT2B1O00204 365 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms