RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SERTAD2Q14140 314 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 OR4K15Q8NH41 348 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 C20orf24Q9BUV8 137 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 NELFAQ9H3P2 528 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 LUZP4Q9P127 313 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 ZNF337Q9Y3M9 751 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 TTLL8A6PVC2 850 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 HSPB6O14558 160 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 HNRNPA1P09651 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCN1B-202ENST00000415950 HNRNPA2B1P22626 353 aaKnown RBP11.88□□□□□ -0.51
SCN1B-202ENST00000415950 DCTDP32321 178 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 HTRA3P83110 453 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 SLC38A6Q8IZM9 456 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 WDSUB1Q8N9V3 476 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
SCN1B-202ENST00000415950 ZNF845Q96IR2 970 aaPredicted RBP11.88□□□□□ -0.51
SCN1B-202ENST00000415950 HHIPQ96QV1 700 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 CHRDQ9H2X0 955 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 ZNF768Q9H5H4 540 aaKnown RBP11.88□□□□□ -0.51
SCN1B-202ENST00000415950 SLC22A23A1A5C7 686 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 TSTD3H0UI37 97 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 OPRD1P41143 372 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 BCL6P41182 706 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 OR52W1Q6IF63 320 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 OR10K2Q6IF99 312 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 PAPD4Q6PIY7 484 aaKnown RBP11.88□□□□□ -0.51
SCN1B-202ENST00000415950 FAM57BQ71RH2 274 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 MRPL21Q7Z2W9 205 aaKnown RBP11.88□□□□□ -0.51
SCN1B-202ENST00000415950 PLXDC1Q8IUK5 500 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 MRPL41Q8IXM3 137 aaKnown RBP11.88□□□□□ -0.51
SCN1B-202ENST00000415950 OR5K2Q8NHB8 316 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 NMNAT2Q9BZQ4 307 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 TGIF2Q9GZN2 237 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 SLC6A17Q9H1V8 727 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 A4GALTQ9NPC4 353 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 FBXL4Q9UKA2 621 aa11.88□□□□□ -0.51
SCN1B-202ENST00000415950 EFCAB7A8K855 629 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 NSA2O95478 260 aaKnown RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 RD3LP0DJH9 198 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 ITGB7P26010 798 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 EEF1A1P68104 462 aaKnown RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 TPBGQ13641 420 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 IRF4Q15306 451 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 STEAP1BQ6NZ63 245 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 PIGCQ92535 297 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 TRMT61AQ96FX7 289 aaKnown RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 ZDHHC5Q9C0B5 715 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 NRIP3Q9NQ35 241 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 C19orf12Q9NSK7 152 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 SPHK1Q9NYA1 384 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 H0YGG7 62 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 CTSAP10619 480 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 CHATP28329 748 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 UBE2NP61088 152 aaKnown RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 UBA52P62987 128 aaKnown RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 TAGLNQ01995 201 aaKnown RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 SLC36A2Q495M3 483 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 HENMT1Q5T8I9 393 aaKnown RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 BADQ92934 168 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 ARHGAP9Q9BRR9 750 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 DZANK1Q9NVP4 752 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 CBLCQ9ULV8 474 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 TRIP12Q14669 1992 aaPredicted RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 P2RX6O15547 441 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 SRMP19623 302 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 TPMTP51580 245 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 CLDN20P56880 219 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 CPXM2Q8N436 756 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 HSD17B8Q92506 261 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 TBC1D20Q96BZ9 403 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 CGGBP1Q9UFW8 167 aaPredicted RBP11.87□□□□□ -0.51
SCN1B-202ENST00000415950 TRAPPC2P0DI81 140 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 TRAPPC2BP0DI82 140 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 IFITM2Q01629 132 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 ARHGAP19Q14CB8 494 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 CD276Q5ZPR3 534 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 LAIR2Q6ISS4 152 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 ZNF683Q8IZ20 524 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 SUMF1Q8NBK3 374 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 MIB2Q96AX9 1013 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 SUCNR1Q9BXA5 334 aa11.87□□□□□ -0.51
SCN1B-202ENST00000415950 SHOXO15266 292 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 LIMS3P0CW19 117 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 LIMS4P0CW20 117 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 PIPP12273 146 aaPredicted RBP11.86□□□□□ -0.51
SCN1B-202ENST00000415950 RFX2P48378 723 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 CCR9P51686 369 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 HTD2P86397 168 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ACSM1Q08AH1 577 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 RIPPLY1Q0D2K3 151 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 KCNAB1Q14722 419 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 LTC4SQ16873 150 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 GLYATL3Q5SZD4 288 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ZBTB37Q5TC79 503 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 ABHD17CQ6PCB6 329 aa11.86□□□□□ -0.51
SCN1B-202ENST00000415950 Q6ZTK2 550 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms