RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 PCDHB10Q9UN67 800 aa16.57■□□□□ 0.24
UBXN4-202ENST00000415164 TPD52L2O43399 206 aaKnown RBP16.56■□□□□ 0.24
UBXN4-202ENST00000415164 CLPTM1O96005 669 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 LCKP06239 509 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 CCL2P13500 99 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 CDH12P55289 794 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 TMEM33P57088 247 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 SELENOVP59797 346 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 CCL8P80075 99 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 SCARB2Q14108 478 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 FXNQ16595 210 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 TMEM154Q6P9G4 183 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 ZNF771Q7L3S4 317 aaPredicted RBP16.56■□□□□ 0.24
UBXN4-202ENST00000415164 RANBP3LQ86VV4 465 aaPredicted RBP16.56■□□□□ 0.24
UBXN4-202ENST00000415164 SKA3Q8IX90 412 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 SNX33Q8WV41 574 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 SLC41A3Q96GZ6 507 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 ZNF75AQ96N20 296 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 CDH20Q9HBT6 801 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 MRPL39Q9NYK5 338 aaKnown RBP16.56■□□□□ 0.24
UBXN4-202ENST00000415164 NKIRAS1Q9NYS0 192 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 FBXL3Q9UKT7 428 aa16.56■□□□□ 0.24
UBXN4-202ENST00000415164 LOC105371242A0A075B767 164 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 A0A0B4J2E0 115 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 A0A1B0GX12 115 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 PRORSD1PA6NEY8 169 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 PLPP3O14495 311 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 PNPP00491 289 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 BMP2P12643 396 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 MYBPC1Q00872 1141 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 GLO1Q04760 184 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 RBBP4Q09028 425 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 MELKQ14680 651 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 TNFAIP8L3Q5GJ75 292 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 DEF8Q6ZN54 512 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 ARMC8Q8IUR7 673 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 C10orf111Q8N326 155 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 OR6S1Q8NH40 331 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 FGFBP3Q8TAT2 258 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 ZNF607Q96SK3 696 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 SH3GL3Q99963 347 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 DENND2DQ9H6A0 471 aaPredicted RBP16.55■□□□□ 0.24
UBXN4-202ENST00000415164 SLC25A37Q9NYZ2 338 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 SLAMF8Q9P0V8 285 aa16.55■□□□□ 0.24
UBXN4-202ENST00000415164 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.55■□□□□ 0.24
UBXN4-202ENST00000415164 EPHA1P21709 976 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 SLC6A2P23975 617 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 SLC35D2Q76EJ3 337 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 ZNF627Q7L945 461 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 PXKQ7Z7A4 578 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 CROCCP2Q86T23 111 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 PEG10Q86TG7 708 aaKnown RBP16.54■□□□□ 0.24
UBXN4-202ENST00000415164 ZNF584Q8IVC4 421 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 MSRB3Q8IXL7 192 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 SLC22A24Q8N4F4 322 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 SMYD1Q8NB12 490 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 SLC30A7Q8NEW0 376 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 OR5J2Q8NH18 312 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 ZFAND2BQ8WV99 257 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 TSPAN32Q96QS1 320 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 WFDC6Q9BQY6 131 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 GLTPQ9NZD2 209 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 CCDC167Q9P0B6 97 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 GPR160Q9UJ42 338 aa16.54■□□□□ 0.24
UBXN4-202ENST00000415164 TRAV20A0A0B4J274 112 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 TRIM77I1YAP6 450 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 M0R3H8 397 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 KPNA4O00629 521 aaPredicted RBP16.53■□□□□ 0.24
UBXN4-202ENST00000415164 WIPF1O43516 503 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 RNF13O43567 381 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 SERPINB7O75635 380 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 FARS2O95363 451 aaKnown RBP16.53■□□□□ 0.24
UBXN4-202ENST00000415164 SERPINA5P05154 406 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 KLF3P57682 345 aaPredicted RBP16.53■□□□□ 0.24
UBXN4-202ENST00000415164 ERVS71-1P61550 626 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 LMO4P61968 165 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 TMEM53Q6P2H8 277 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 PIWIL3Q7Z3Z3 882 aaKnown RBP16.53■□□□□ 0.24
UBXN4-202ENST00000415164 SYNPRQ8TBG9 265 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 ZNF566Q969W8 418 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 MCHR1Q99705 422 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 RACGAP1Q9H0H5 632 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 ZNF385DQ9H6B1 395 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 ZNF665Q9H7R5 613 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 HINT3Q9NQE9 182 aaKnown RBP16.53■□□□□ 0.24
UBXN4-202ENST00000415164 USH1CQ9Y6N9 552 aa16.53■□□□□ 0.24
UBXN4-202ENST00000415164 SLC22A23A1A5C7 686 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 CPSF4LA6NMK7 179 aaKnown RBP16.52■□□□□ 0.24
UBXN4-202ENST00000415164 C17orf100A8MU93 164 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 POLR3GO15318 223 aaPredicted RBP16.52■□□□□ 0.24
UBXN4-202ENST00000415164 TPST2O60704 377 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 RP2O75695 350 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 MPZL1O95297 269 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 CH25HO95992 272 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 MT-ATP6P00846 226 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 OPN1SWP03999 348 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 OR8G3PP0DMU2 310 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 UMPSP11172 480 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 ANPEPP15144 967 aa16.52■□□□□ 0.24
UBXN4-202ENST00000415164 HOXB9P17482 250 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms