RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GSG1Q2KHT4 349 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 NHLRC1Q6VVB1 395 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 B3GLCTQ6Y288 498 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 PIGWQ7Z7B1 504 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 OFCC1Q8IZS5 231 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 RNF148Q8N7C7 305 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 IL17RDQ8NFM7 739 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 TMEM54Q969K7 222 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 BPIFA2Q96DR5 249 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 HSH2DQ96JZ2 352 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 CACNG6Q9BXT2 260 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 GSX1Q9H4S2 264 aaPredicted RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 NDE1Q9NXR1 346 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 STX18Q9P2W9 335 aaKnown RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 CRNNQ9UBG3 495 aaPredicted RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 EGFL7Q9UHF1 273 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 TAGLN3Q9UI15 199 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 SAMD4AQ9UPU9 718 aaKnown RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 SNX13Q9Y5W8 968 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 SETD2Q9BYW2 2564 aaPredicted RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 TRIM64A6NGJ6 449 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 TRIM64BA6NI03 449 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 J3KTA2 159 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 PIP5K1CO60331 668 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 UBL3O95164 117 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 FARS2O95363 451 aaKnown RBP9.75□□□□□ -0.85
RFFL-204ENST00000414419 RAB36O95755 333 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 IGKV3-15P01624 115 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 IGLV1-44P01699 117 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 HLA-HP01893 362 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 TCN1P20061 433 aaPredicted RBP9.75□□□□□ -0.85
RFFL-204ENST00000414419 AQP2P41181 271 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 MNAT1P51948 309 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 NUDT6P53370 316 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 PIGFQ07326 219 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 KRT72Q14CN4 511 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 VHLLQ6RSH7 139 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 C16orf89Q6UX73 402 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 CLEC9AQ6UXN8 241 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 ZNF730Q6ZMV8 503 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 PIWIL3Q7Z3Z3 882 aaKnown RBP9.75□□□□□ -0.85
RFFL-204ENST00000414419 MDP1Q86V88 176 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 NRMQ8IXM6 262 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 RNF113BQ8IZP6 322 aaKnown RBP9.75□□□□□ -0.85
RFFL-204ENST00000414419 OR4F15Q8NGB8 312 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 LIPHQ8WWY8 451 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 FBXO17Q96EF6 278 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 CA10Q9NS85 328 aa9.75□□□□□ -0.85
RFFL-204ENST00000414419 CENPBD1B2RD01 187 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 DHHO43323 396 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 SSX4O60224 188 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 IGHV4-39P01824 125 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 CELA3BP08861 270 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 QDPRP09417 244 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 PGA4P0DJD7 388 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 PGA3P0DJD8 388 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 OR8G3PP0DMU2 310 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 NR2C1P13056 603 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 ACVR1BP36896 505 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 SERPINF1P36955 418 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 PTDSS1P48651 473 aaKnown RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 ZNF84P51523 738 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 SNRPD2P62316 118 aaKnown RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 PRKCDQ05655 676 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 LAPTM4AQ15012 233 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 TAF11Q15544 211 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 ANKDD1AQ495B1 522 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 ALG10Q5BKT4 473 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 SAMD4BQ5PRF9 694 aaKnown RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 GKAP1Q5VSY0 366 aaPredicted RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 LRFN4Q6PJG9 635 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 ZNF627Q7L945 461 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 OAFQ86UD1 273 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 WDFY1Q8IWB7 410 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 PGAM4Q8N0Y7 254 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 CIARTQ8N365 385 aaPredicted RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 SYT14Q8NB59 555 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 MOSPD2Q8NHP6 518 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 ACOT11Q8WXI4 607 aaPredicted RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 COX4I2Q96KJ9 171 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 CCT8L2Q96SF2 557 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 CDRT15Q96T59 188 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 RHNO1Q9BSD3 238 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 NDEL1Q9GZM8 345 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 DENND2DQ9H6A0 471 aaPredicted RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 DCAF13Q9NV06 445 aaKnown RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 GDF2Q9UK05 429 aaPredicted RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 FBXL3Q9UKT7 428 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 HIF3AQ9Y2N7 669 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 SPEF1Q9Y4P9 236 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 ENPP4Q9Y6X5 453 aa9.74□□□□□ -0.85
RFFL-204ENST00000414419 ZNF469Q96JG9 3925 aaPredicted RBP9.74□□□□□ -0.85
RFFL-204ENST00000414419 VPS13CQ709C8 3753 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 ZNF503-AS2A6NEH8 195 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 EFCAB9A8MZ26 197 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 FFAR1O14842 300 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 NDUFS7O75251 213 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 TRMUO75648 421 aaKnown RBP9.73□□□□□ -0.85
RFFL-204ENST00000414419 H1F0P07305 194 aaKnown RBP9.73□□□□□ -0.85
RFFL-204ENST00000414419 ACADSP16219 412 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms