RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 COQ3Q9NZJ6 369 aa12.55□□□□□ -0.4
NUB1-201ENST00000413040 SLC22A13Q9Y226 551 aa12.55□□□□□ -0.4
NUB1-201ENST00000413040 C2CD4DB7Z1M9 353 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 UPK3AO75631 287 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 SLC22A5O76082 557 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 RAF1P04049 648 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 MYF5P13349 255 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 RORAP35398 523 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 TAS2R20P59543 309 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 UBE2MP61081 183 aaKnown RBP12.54□□□□□ -0.4
NUB1-201ENST00000413040 RPS4XP62701 263 aaKnown RBP12.54□□□□□ -0.4
NUB1-201ENST00000413040 SKP2Q13309 424 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 SNTA1Q13424 505 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 ELOCQ15369 112 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 NSDHLQ15738 373 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 MEP1BQ16820 701 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 MAMSTRQ6ZN01 415 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 FAM122BQ7Z309 247 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 ARHGEF39Q8N4T4 335 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 OR52B4Q8NGK2 314 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 THAP3Q8WTV1 239 aaPredicted RBP12.54□□□□□ -0.4
NUB1-201ENST00000413040 NXPE2Q96DL1 559 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 KLHL15Q96M94 604 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 ELOVL3Q9HB03 270 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 FOXJ3Q9UPW0 622 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 CIB4A0PJX0 185 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 PTH2RP49190 550 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 SLC37A1P57057 533 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 PSMA6P60900 246 aaKnown RBP12.54□□□□□ -0.4
NUB1-201ENST00000413040 CBFBQ13951 182 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 ETFDHQ16134 617 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.54□□□□□ -0.4
NUB1-201ENST00000413040 PCGF3Q3KNV8 242 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 FGD2Q7Z6J4 655 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 TSTD1Q8NFU3 115 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 GINS4Q9BRT9 223 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 ZNF436Q9C0F3 470 aaPredicted RBP12.54□□□□□ -0.4
NUB1-201ENST00000413040 TWSG1Q9GZX9 223 aa12.54□□□□□ -0.4
NUB1-201ENST00000413040 ZSCAN5BA6NJL1 495 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 RHPN2P1A8MT19 583 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 SLC16A7O60669 478 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 WISP1O95388 367 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 ECDO95905 644 aaPredicted RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 SULT1A3P0DMM9 295 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 SULT1A4P0DMN0 295 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 MAPK3P27361 379 aaPredicted RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 ZP1P60852 638 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 GUCA2AQ02747 115 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 CCINQ13939 588 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 OR7E24Q6IFN5 339 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 NLRC3Q7RTR2 1065 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 DND1Q8IYX4 353 aaKnown RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 GPR148Q8TDV2 347 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 MAP6Q96JE9 813 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 LCORQ96JN0 433 aaPredicted RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 SLC19A3Q9BZV2 496 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 ZCCHC4Q9H5U6 513 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 CUTCQ9NTM9 273 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 TRAV18A0A075B6X5 111 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 MEIKINA0A087WXM9 373 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 SMAD9O15198 467 aaKnown RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 RBBP9O75884 186 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 SIX6O95475 246 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 ZNF117Q03924 483 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 IL10RAQ13651 578 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 MELKQ14680 651 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 FAM69AQ5T7M9 428 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 CHMP1BQ7LBR1 199 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 CCDC74AQ96AQ1 378 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 OR11A1Q9GZK7 315 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 TMEM138Q9NPI0 162 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 SCP2D1Q9UJQ7 156 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 THADAQ6YHU6 1953 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 A0A1B0GVI7 797 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 GSTZ1O43708 216 aaPredicted RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 KDM4BO94953 1096 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 IGFBP4P22692 258 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 PPICP45877 212 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 CAMK2BQ13554 666 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 EXOSC2Q13868 293 aaKnown RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 ZNF782Q6ZMW2 699 aaPredicted RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 C16orf47Q6ZP98 133 aaPredicted RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 RFPL4BQ6ZWI9 263 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 CCDC28AQ8IWP9 274 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 PLPP7Q8NBV4 271 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 PHYHIPQ92561 330 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 DVL3Q92997 716 aaPredicted RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 HAVCR1Q96D42 359 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 WDR89Q96FK6 387 aaPredicted RBP12.53□□□□□ -0.4
NUB1-201ENST00000413040 DPYSL5Q9BPU6 564 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 GMEB2Q9UKD1 530 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 MOKQ9UQ07 419 aa12.53□□□□□ -0.4
NUB1-201ENST00000413040 M0R233 179 aa12.52□□□□□ -0.41
NUB1-201ENST00000413040 ACOT7O00154 380 aa12.52□□□□□ -0.41
NUB1-201ENST00000413040 SCO1O75880 301 aa12.52□□□□□ -0.41
NUB1-201ENST00000413040 IL33O95760 270 aa12.52□□□□□ -0.41
NUB1-201ENST00000413040 ASAH2BP0C7U1 165 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms