RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 V9GYH0 126 aa4.77□□□□□ -1.65
LINC00342-201ENST00000412393 TEX15Q9BXT5 2789 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 TRBV23-1A0A0A0MS06 115 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ARPC4-TTLL3A0A0A6YYG9 625 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 LRRC3CA6NJW4 275 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 B4DXG7 233 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 TRIM77I1YAP6 450 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 CCRL2O00421 344 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 RGS14O43566 566 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 PCDH7O60245 1069 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SCN2BO60939 215 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 WDR1O75083 606 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SLC43A1O75387 559 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 TOX4O94842 621 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 MFN2O95140 757 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ATP1B1P05026 303 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 LCKP06239 509 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 IL3P08700 152 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 HOXD4P09016 255 aaPredicted RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 HKR1P10072 659 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 G6PDP11413 515 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 DDX5P17844 614 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 PRKACGP22612 351 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 GADD45AP24522 165 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 GDF1P27539 372 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ABCD3P28288 659 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 CHRNB4P30926 498 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 TIA1P31483 386 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 KDELR2P33947 212 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 KRT20P35900 424 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 B2MP61769 119 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SNRPGP62308 76 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 RAE1P78406 368 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 MRPS15P82914 257 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 HMGCS1Q01581 520 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 C2orf80Q0P641 193 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 PMPCAQ10713 525 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 MFSD13AQ14CX5 517 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 LTB4RQ15722 352 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 NNATQ16517 81 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 TBRG1Q3YBR2 411 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 RFTN2Q52LD8 501 aaPredicted RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 HSD17B12Q53GQ0 312 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SPIN4Q56A73 249 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ARMCX4Q5H9R4 360 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 C1orf185Q5T7R7 199 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 NXNL2Q5VZ03 156 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 FAM180BQ6P0A1 224 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 FAM122CQ6P4D5 195 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SCIMPQ6UWF3 145 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 MEX3BQ6ZN04 569 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 NUP54Q7Z3B4 507 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SNX29P2Q8IUI4 249 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SAMD14Q8IZD0 417 aaPredicted RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 CMTM4Q8IZR5 234 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 LIX1Q8N485 282 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 LINC00469Q8N7U9 141 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 FNDC5Q8NAU1 212 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 C17orf47Q8NEP4 570 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 OR10Q1Q8NGQ4 319 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 OR10A6Q8NH74 314 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 CDC26Q8NHZ8 85 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 LHFPL5Q8TAF8 219 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SPPL2AQ8TCT8 520 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ZNF675Q8TD23 568 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 C16orf78Q8WTQ4 265 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 LINC00476Q8WZB0 136 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 FIG4Q92562 907 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ADIPOR1Q96A54 375 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 EXOSC8Q96B26 276 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 CTHRC1Q96CG8 243 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 CNRIP1Q96F85 164 aaPredicted RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 APIPQ96GX9 242 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 TMEM80Q96HE8 168 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ITCHQ96J02 903 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 HYLS1Q96M11 299 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 JSRP1Q96MG2 331 aaPredicted RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ZNF681Q96N22 645 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SECISBP2Q96T21 854 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 THUMPD3Q9BV44 507 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ANGPTL4Q9BY76 406 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ACPTQ9BZG2 426 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SRRQ9GZT4 340 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ENKD1Q9H0I2 346 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ACKR4Q9NPB9 350 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 KCNJ16Q9NPI9 418 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 RPRD1BQ9NQG5 326 aaKnown RBP4.76□□□□□ -1.65
LINC00342-201ENST00000412393 POLE4Q9NR33 117 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 GIMAP4Q9NUV9 329 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 MED9Q9NWA0 146 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 SPRR3Q9UBC9 169 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 B4GALT7Q9UBV7 327 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 PRODH2Q9UF12 536 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 UTS2RQ9UKP6 389 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 DTX4Q9Y2E6 619 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 FIS1Q9Y3D6 152 aa4.76□□□□□ -1.65
LINC00342-201ENST00000412393 ABCA12Q86UK0 2595 aa4.75□□□□□ -1.65
LINC00342-201ENST00000412393 NKX2-6A6NCS4 301 aa4.75□□□□□ -1.65
LINC00342-201ENST00000412393 LEUTXA8MZ59 168 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms