RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 RASSF2P50749 326 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 DAP3P51398 398 aaKnown RBP11.52□□□□□ -0.57
HDAC8-210ENST00000412342 ZBED5Q49AG3 693 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 C1QTNF12Q5T7M4 302 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 OR2T5Q6IEZ7 315 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 C1orf94Q6P1W5 598 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 PGBD2Q6P3X8 592 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 ANKRD16Q6P6B7 361 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 LRFN4Q6PJG9 635 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 THSD4Q6ZMP0 1018 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 RRM2BQ7LG56 351 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 FAM122BQ7Z309 247 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 CDK20Q8IZL9 346 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 NOXO1Q8NFA2 376 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 OR2T29Q8NH02 315 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF519Q8TB69 540 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 HDAC2Q92769 488 aaKnown RBP11.52□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF566Q969W8 418 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 SLCO4A1Q96BD0 722 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 RSRC1Q96IZ7 334 aaKnown RBP11.52□□□□□ -0.57
HDAC8-210ENST00000412342 TSPAN32Q96QS1 320 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 GPX7Q96SL4 187 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-210ENST00000412342 CHID1Q9BWS9 393 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 ULBP2Q9BZM5 246 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 MMADHCQ9H3L0 296 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-210ENST00000412342 GLTPQ9NZD2 209 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 AMDHD2Q9Y303 409 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 CADP27708 2225 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 AKAP9Q99996 3911 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 SEC14L2O76054 403 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 STAMBPO95630 424 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 PLAUP00749 431 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 IGHG1P01857 330 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 ACADSP16219 412 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 CDH2P19022 906 aaPredicted RBP11.51□□□□□ -0.57
HDAC8-210ENST00000412342 FPR3P25089 353 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 NR1H2P55055 460 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 CTXN1P60606 82 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 PRPS1P60891 318 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 RPL27P61353 136 aaKnown RBP11.51□□□□□ -0.57
HDAC8-210ENST00000412342 CBX1P83916 185 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 PPP1R8Q12972 351 aaKnown RBP11.51□□□□□ -0.57
HDAC8-210ENST00000412342 TAF11Q15544 211 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 ALKBH2Q6NS38 261 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 PAPD5Q8NDF8 572 aaKnown RBP11.51□□□□□ -0.57
HDAC8-210ENST00000412342 OR6N1Q8NGY5 312 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 LILRB1Q8NHL6 650 aaPredicted RBP11.51□□□□□ -0.57
HDAC8-210ENST00000412342 UTP4Q969X6 686 aaKnown RBP11.51□□□□□ -0.57
HDAC8-210ENST00000412342 MUCL1Q96DR8 90 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 KCNK17Q96T54 332 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 KATNB1Q9BVA0 655 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 OBP2BQ9NPH6 170 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF224Q9NZL3 707 aa11.51□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF346Q9UL40 294 aaKnown RBP11.51□□□□□ -0.57
HDAC8-210ENST00000412342 A0A096LPE4 126 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 IGKV1D-43A0A0B4J1Z2 117 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 A0A1W2PPZ6 126 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 UNC119BA6NIH7 251 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 TNFRSF11BO00300 401 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 OR10H3O60404 316 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 NDUFB2O95178 105 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 CD14P08571 375 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-210ENST00000412342 TOP3AQ13472 1001 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-210ENST00000412342 C10orf128Q5T292 105 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 PAMR1Q6UXH9 720 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF704Q6ZNC4 412 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-210ENST00000412342 HDDC2Q7Z4H3 204 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 CDH24Q86UP0 819 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 SPATA24Q86W54 205 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 OR9Q2Q8NGE9 314 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 MCHR2Q969V1 340 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 FOXB1Q99853 325 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 ESRP2Q9H6T0 727 aaKnown RBP11.5□□□□□ -0.57
HDAC8-210ENST00000412342 NGBQ9NPG2 151 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 KRCC1Q9NPI7 259 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-210ENST00000412342 B3GAT2Q9NPZ5 323 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 NRIP3Q9NQ35 241 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 CCM2LQ9NUG4 571 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-210ENST00000412342 CRNNQ9UBG3 495 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-210ENST00000412342 TMCC3Q9ULS5 477 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 AURKCQ9UQB9 309 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 ADAM18Q9Y3Q7 739 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 ROS1P08922 2347 aa11.5□□□□□ -0.57
HDAC8-210ENST00000412342 DHHO43323 396 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 FKBP6O75344 327 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 QDPRP09417 244 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 HOXB6P17509 224 aaKnown RBP11.49□□□□□ -0.57
HDAC8-210ENST00000412342 ERFP50548 548 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF83P51522 516 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 CLRN1P58418 232 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 ERVK-25P63136 954 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 TUBA1BP68363 451 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 TUBA4AP68366 448 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 FMODQ06828 376 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 SPOCK1Q08629 439 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 TSPAN31Q12999 210 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 MESTQ5EB52 335 aa11.49□□□□□ -0.57
HDAC8-210ENST00000412342 FBXW10Q5XX13 1052 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms