RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 LINC01560Q8TB33 94 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 ZNF519Q8TB69 540 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 FANK1Q8TC84 345 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 GNPDA2Q8TDQ7 276 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 NANOS1Q8WY41 292 aaKnown RBP7.22□□□□□ -1.25
RPE-204ENST00000411934 NRBF2Q96F24 287 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 FAM46AQ96IP4 442 aaKnown RBP7.22□□□□□ -1.25
RPE-204ENST00000411934 RSRC1Q96IZ7 334 aaKnown RBP7.22□□□□□ -1.25
RPE-204ENST00000411934 RADILQ96JH8 1075 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 KCNK17Q96T54 332 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 WACQ9BTA9 647 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 CHID1Q9BWS9 393 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 DGCR6LQ9BY27 220 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 MRPL13Q9BYD1 178 aaKnown RBP7.22□□□□□ -1.25
RPE-204ENST00000411934 ESRP2Q9H6T0 727 aaKnown RBP7.22□□□□□ -1.25
RPE-204ENST00000411934 GPR35Q9HC97 309 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 SLC17A5Q9NRA2 495 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 ARMC1Q9NVT9 282 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 GLTPQ9NZD2 209 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.22□□□□□ -1.25
RPE-204ENST00000411934 DNAJB9Q9UBS3 223 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 FBXL3Q9UKT7 428 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 MGAT4BQ9UQ53 548 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 SAMHD1Q9Y3Z3 626 aaKnown RBP7.22□□□□□ -1.25
RPE-204ENST00000411934 SLC25A15Q9Y619 301 aa7.22□□□□□ -1.25
RPE-204ENST00000411934 TRAV27A0A087WT01 109 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 UNC119BA6NIH7 251 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 XKRYO14609 159 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 ARPC3O15145 178 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 IDH3BO43837 385 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 FKBP6O75344 327 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 UPK3AO75631 287 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 CCNB2O95067 398 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 TXNDC12O95881 172 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 IGHV3-9P01782 118 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 F13BP05160 661 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 ACADSP16219 412 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 FUT4P22083 530 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 PTAFRP25105 342 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 SDHAP31040 664 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 SLC6A6P31641 620 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 GPR4P46093 362 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 RPS6KA3P51812 740 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 ARHGDIAP52565 204 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 CLRN1P58418 232 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 CTXN1P60606 82 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 GABPB1Q06547 395 aaPredicted RBP7.21□□□□□ -1.26
RPE-204ENST00000411934 MICAQ29983 383 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 CEACAM16Q2WEN9 425 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 TBRG1Q3YBR2 411 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 THEM4Q5T1C6 240 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 ZNF770Q6IQ21 691 aaPredicted RBP7.21□□□□□ -1.26
RPE-204ENST00000411934 ADAM5Q6NVV9 412 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 ZFP1Q6P2D0 407 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 PGBD2Q6P3X8 592 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 TBPL2Q6SJ96 375 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 SEZ6L2Q6UXD5 910 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 TMEM108Q6UXF1 575 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 ZNF620Q6ZNG0 422 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 RASSF6Q6ZTQ3 369 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.21□□□□□ -1.26
RPE-204ENST00000411934 FAM122BQ7Z309 247 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 ZER1Q7Z7L7 766 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 TMEM200AQ86VY9 491 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 OR52L1Q8NGH7 329 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 OR13C2Q8NGS9 318 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 OR52J3Q8NH60 311 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 MOSPD2Q8NHP6 518 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 NINJ1Q92982 152 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 RAB3IPQ96QF0 476 aaPredicted RBP7.21□□□□□ -1.26
RPE-204ENST00000411934 FOXB1Q99853 325 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 TMEM204Q9BSN7 226 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 EMC6Q9BV81 110 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 POLDIP3Q9BY77 421 aaKnown RBP7.21□□□□□ -1.26
RPE-204ENST00000411934 CLEC4MQ9H2X3 399 aaPredicted RBP7.21□□□□□ -1.26
RPE-204ENST00000411934 CRLF2Q9HC73 371 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 NRIP3Q9NQ35 241 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 CRNNQ9UBG3 495 aaPredicted RBP7.21□□□□□ -1.26
RPE-204ENST00000411934 BAIAP2Q9UQB8 552 aa7.21□□□□□ -1.26
RPE-204ENST00000411934 UTP20O75691 2785 aaKnown RBP7.2□□□□□ -1.26
RPE-204ENST00000411934 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.2□□□□□ -1.26
RPE-204ENST00000411934 M0R3G1 203 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 GNGT2O14610 69 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 DHHO43323 396 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 TRMUO75648 421 aaKnown RBP7.2□□□□□ -1.26
RPE-204ENST00000411934 SERPINI2O75830 405 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 UBL3O95164 117 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 FARS2O95363 451 aaKnown RBP7.2□□□□□ -1.26
RPE-204ENST00000411934 IGKV3-15P01624 115 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 ANXA8P13928 327 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 NPR2P20594 1047 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 LOXP28300 417 aaPredicted RBP7.2□□□□□ -1.26
RPE-204ENST00000411934 RPL4P36578 427 aaKnown RBP7.2□□□□□ -1.26
RPE-204ENST00000411934 ZNF84P51523 738 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 FXYD6P3P58550 94 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 UBE2NP61088 152 aaKnown RBP7.2□□□□□ -1.26
RPE-204ENST00000411934 ACTR3P61158 418 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 MRPS34P82930 218 aaKnown RBP7.2□□□□□ -1.26
RPE-204ENST00000411934 CBX1P83916 185 aa7.2□□□□□ -1.26
RPE-204ENST00000411934 CAMK2DQ13557 499 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms