RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 GNGT1P63211 74 aa16.53■□□□□ 0.24
SF3A1-202ENST00000411423 NPRL3Q12980 569 aa16.53■□□□□ 0.24
SF3A1-202ENST00000411423 LIPHQ8WWY8 451 aa16.53■□□□□ 0.24
SF3A1-202ENST00000411423 MS4A3Q96HJ5 214 aa16.53■□□□□ 0.24
SF3A1-202ENST00000411423 HSH2DQ96JZ2 352 aa16.53■□□□□ 0.24
SF3A1-202ENST00000411423 POFUT2Q9Y2G5 429 aa16.53■□□□□ 0.24
SF3A1-202ENST00000411423 CR1P17927 2039 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 IGHV2OR16-5A0A0B4J2B6 119 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 LY6HO94772 140 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 IGF2P01344 180 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 HIST1H2ABP04908 130 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 THRBP10828 461 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 MAKP20794 623 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 PRDX6P30041 224 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 CAPZA2P47755 286 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 PIGFQ07326 219 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 FHL1Q13642 323 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 LAPTM4AQ15012 233 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 ADIPOQQ15848 244 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 HIST3H2AQ7L7L0 130 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 ASB10Q8WXI3 467 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 HIST1H2ACQ93077 130 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 FBXO17Q96EF6 278 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 SLC25A44Q96H78 314 aaPredicted RBP16.52■□□□□ 0.24
SF3A1-202ENST00000411423 ADAD1Q96M93 576 aaKnown RBP16.52■□□□□ 0.24
SF3A1-202ENST00000411423 HS6ST2Q96MM7 605 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 ZNF347Q96SE7 839 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 MRPL13Q9BYD1 178 aaKnown RBP16.52■□□□□ 0.24
SF3A1-202ENST00000411423 B3GAT2Q9NPZ5 323 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 CA10Q9NS85 328 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 EGFL7Q9UHF1 273 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 MED31Q9Y3C7 131 aa16.52■□□□□ 0.24
SF3A1-202ENST00000411423 IGHV4-30-2A0A087WSY4 118 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 H7C417 338 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 GSTA4O15217 222 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 CRYAAP02489 173 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 CD79AP11912 226 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 ZNF14P17017 642 aaPredicted RBP16.51■□□□□ 0.23
SF3A1-202ENST00000411423 MYBPC1Q00872 1141 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 ST3GAL3Q11203 375 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 ETFDHQ16134 617 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 HIST3H3Q16695 136 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 MSMPQ1L6U9 139 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 VHLLQ6RSH7 139 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 TBPL2Q6SJ96 375 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 SKA3Q8IX90 412 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 OFCC1Q8IZS5 231 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 RNF148Q8N7C7 305 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 FAM86B1Q8N7N1 296 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 FAM156AQ8NDB6 213 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 ZNF566Q969W8 418 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 CMTM5Q96DZ9 223 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 SEPHS2Q99611 448 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 KCTD14Q9BQ13 255 aaPredicted RBP16.51■□□□□ 0.23
SF3A1-202ENST00000411423 REG4Q9BYZ8 158 aa16.51■□□□□ 0.23
SF3A1-202ENST00000411423 A0A096LNT2 108 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 IGKV1D-43A0A0B4J1Z2 117 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 TRMUO75648 421 aaKnown RBP16.5■□□□□ 0.23
SF3A1-202ENST00000411423 BCL10O95999 233 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 IFNW1P05000 195 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 QDPRP09417 244 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 IFI30P13284 250 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 THBS4P35443 961 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 ARR3P36575 388 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 IFI44LQ53G44 452 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 ARMC4Q5T2S8 1044 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 PIGWQ7Z7B1 504 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 CPLX4Q7Z7G2 160 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 LRRC75AQ8NAA5 344 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 GEMIN6Q8WXD5 167 aaKnown RBP16.5■□□□□ 0.23
SF3A1-202ENST00000411423 LZICQ8WZA0 190 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 INIPQ9NRY2 104 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 ARL8BQ9NVJ2 186 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 FN1P02751 2386 aaKnown RBP16.5■□□□□ 0.23
SF3A1-202ENST00000411423 ARFGEF3Q5TH69 2177 aa16.5■□□□□ 0.23
SF3A1-202ENST00000411423 NSD1Q96L73 2696 aaPredicted RBP16.49■□□□□ 0.23
SF3A1-202ENST00000411423 A0A087WUU8 490 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 DHHO43323 396 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 IGFBP1P08833 259 aaPredicted RBP16.49■□□□□ 0.23
SF3A1-202ENST00000411423 PAX7P23759 505 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 NUDT6P53370 316 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 GSG1Q2KHT4 349 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 IGFN1Q86VF2 1251 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 ZNF584Q8IVC4 421 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 NRMQ8IXM6 262 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 CCDC36Q8IYA8 594 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 ZNF525Q8N782 197 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 SYT14Q8NB59 555 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 NOXO1Q8NFA2 376 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 NUP37Q8NFH4 326 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 OR10H5Q8NGA6 315 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 NANOS1Q8WY41 292 aaKnown RBP16.49■□□□□ 0.23
SF3A1-202ENST00000411423 HDAC2Q92769 488 aaKnown RBP16.49■□□□□ 0.23
SF3A1-202ENST00000411423 MCHR2Q969V1 340 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 FAM162AQ96A26 154 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 NMD3Q96D46 503 aaKnown RBP16.49■□□□□ 0.23
SF3A1-202ENST00000411423 BPIFA2Q96DR5 249 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 SORCS2Q96PQ0 1159 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 SH3GL3Q99963 347 aa16.49■□□□□ 0.23
SF3A1-202ENST00000411423 KCNS3Q9BQ31 491 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms