RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 RPE65Q16518 533 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 MED25Q71SY5 747 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 NLRC3Q7RTR2 1065 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 TERB2Q8NHR7 220 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 BORCS6Q96GS4 357 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 DOCK8Q8NF50 2099 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 ARPC4-TTLL3A0A0A6YYG9 625 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 LY86O95711 162 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 HMGN2P05204 90 aaKnown RBP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 LMO3Q8TAP4 145 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 TMEM208Q9BTX3 173 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 ACSS1Q9NUB1 689 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 PPT2Q9UMR5 302 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 C20orf202A1L168 122 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 PPIHO43447 177 aaKnown RBP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 UBE2KP61086 200 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 GK3PQ14409 553 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 SARGQ9BW04 601 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 COPS3Q9UNS2 423 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 LRP5LA4QPB2 252 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 J3KTA2 159 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 SPNS3Q6ZMD2 512 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 MOB3BQ86TA1 216 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 MARCH3Q86UD3 253 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 OR52N5Q8NH56 324 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 ROBO4Q8WZ75 1007 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 ST8SIA4Q92187 359 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 MUL1Q969V5 352 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 PRSS21Q9Y6M0 314 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 DOCK3Q8IZD9 2030 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 TRHRP34981 398 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 GPR12P47775 334 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 ELLP55199 621 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 UBE2G1P62253 170 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 TLE4Q04727 773 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 DUSP7Q16829 419 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 CDC20BQ86Y33 519 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 B3GNT7Q8NFL0 401 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 TXNL4BQ9NX01 149 aaKnown RBP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 RNF150Q9ULK6 438 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 FZR1Q9UM11 496 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 ZNF785A8K8V0 405 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 LTB4RQ15722 352 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 CYP4V2Q6ZWL3 525 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 FAM174AQ8TBP5 190 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 PIGTQ969N2 578 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 THAP7Q9BT49 309 aaPredicted RBP10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 ISYNA1Q9NPH2 558 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 IGSF5Q9NSI5 407 aa10.39□□□□□ -0.75
PRPF40A-202ENST00000410080 CT45A10P0DMU9 189 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 HTN1P15515 57 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 DCAF7P61962 342 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 TNFRSF17Q02223 184 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 OR10G3Q8NGC4 313 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 DEDD2Q8WXF8 326 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 LINC01599Q8WXQ3 324 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 ZFP92A6NM28 416 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 KRBOX1C9JBD0 128 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 M0QZQ0 153 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 GIFP27352 417 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 PMPCAQ10713 525 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 SEMA3BQ13214 749 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 FGFBP1Q14512 234 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 Q1RN00 199 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 OR56B4Q8NH76 319 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 SLC38A5Q8WUX1 472 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 CPPED1Q9BRF8 314 aaPredicted RBP10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 PLK3Q9H4B4 646 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 CCL26Q9Y258 94 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 V9GYS6 101 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 POM121CA8CG34 1229 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 AIFM1O95831 613 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 OR5G3P0C626 314 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 ETV4P43268 484 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 TAS2R19P59542 299 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 TUSC5Q8IXB3 177 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 TMEM230Q96A57 120 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 SMIM14Q96QK8 99 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 C1QTNF2Q9BXJ5 285 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 NUBP2Q9Y5Y2 271 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 ENPP4Q9Y6X5 453 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 ZNF623O75123 536 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 SELEP16581 610 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 HIST1H1TP22492 207 aaPredicted RBP10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 GLRA1P23415 457 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 PRTGQ2VWP7 1150 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 PAPD4Q6PIY7 484 aaKnown RBP10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 Q6ZTK2 550 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 GPR26Q8NDV2 337 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 KLF16Q9BXK1 252 aaPredicted RBP10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 CHST11Q9NPF2 352 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 GLTPQ9NZD2 209 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 NXT1Q9UKK6 140 aaKnown RBP10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 PRAMEF25A6NGN4 478 aa10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 GAPDHSO14556 408 aaPredicted RBP10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 MITFO75030 526 aaPredicted RBP10.38□□□□□ -0.75
PRPF40A-202ENST00000410080 G0S2P27469 103 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms