RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 NPAP1Q9NZP6 1156 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 ZNF346Q9UL40 294 aaKnown RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 PDZD2O15018 2839 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 A0A1W2PR80 420 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 UNC119BA6NIH7 251 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 TRMUO75648 421 aaKnown RBP19.59■□□□□ 0.73
PTCD3-203ENST00000409783 ACADSP16219 412 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 FPR3P25089 353 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 TAF11Q15544 211 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 TBRG1Q3YBR2 411 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 HIKESHIQ53FT3 197 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 BEX5Q5H9J7 111 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 CDC20BQ86Y33 519 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 OR52N5Q8NH56 324 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 ZNF519Q8TB69 540 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 MAGEE2Q8TD90 523 aaPredicted RBP19.59■□□□□ 0.73
PTCD3-203ENST00000409783 NMD3Q96D46 503 aaKnown RBP19.59■□□□□ 0.73
PTCD3-203ENST00000409783 MUCL1Q96DR8 90 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 PIK3IP1Q96FE7 263 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 TSPAN32Q96QS1 320 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 ULBP2Q9BZM5 246 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 CADP27708 2225 aa19.59■□□□□ 0.73
PTCD3-203ENST00000409783 POLQO75417 2590 aa19.58■□□□□ 0.73
PTCD3-203ENST00000409783 ZNF99A8MXY4 864 aaPredicted RBP19.58■□□□□ 0.72
PTCD3-203ENST00000409783 CENPBD1B2RD01 187 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 FKBP6O75344 327 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 CST1P01037 141 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 IGHG1P01857 330 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 ZNF133P52736 654 aaPredicted RBP19.58■□□□□ 0.72
PTCD3-203ENST00000409783 RPL27P61353 136 aaKnown RBP19.58■□□□□ 0.72
PTCD3-203ENST00000409783 CCNIQ14094 377 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 ALKBH2Q6NS38 261 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 ANKRD16Q6P6B7 361 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 ZNF627Q7L945 461 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 SSX8Q7RTT4 187 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 FAM122BQ7Z309 247 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 NOXO1Q8NFA2 376 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 OR9Q2Q8NGE9 314 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 HDAC2Q92769 488 aaKnown RBP19.58■□□□□ 0.72
PTCD3-203ENST00000409783 GPX7Q96SL4 187 aaPredicted RBP19.58■□□□□ 0.72
PTCD3-203ENST00000409783 KCNK17Q96T54 332 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 KATNB1Q9BVA0 655 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 REEP1Q9H902 201 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 B3GAT2Q9NPZ5 323 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 SAMHD1Q9Y3Z3 626 aaKnown RBP19.58■□□□□ 0.72
PTCD3-203ENST00000409783 U3KQV3 271 aa19.58■□□□□ 0.72
PTCD3-203ENST00000409783 SPG11Q96JI7 2443 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 AKAP6Q13023 2319 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 NDUFB2O95178 105 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 CD14P08571 375 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 IFNGR2P38484 337 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 ERVK-25P63136 954 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 TOP3AQ13472 1001 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-203ENST00000409783 NCMAPQ5T1S8 102 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 C1QTNF12Q5T7M4 302 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 HDDC2Q7Z4H3 204 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 TMEM179BQ7Z7N9 219 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 LINC00471Q8N535 108 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 GNPDA2Q8TDQ7 276 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 PLPPR2Q96GM1 343 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 TMEM204Q9BSN7 226 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 PLEKHF2Q9H8W4 249 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 NRIP3Q9NQ35 241 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 AMDHD2Q9Y303 409 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 ADAM18Q9Y3Q7 739 aa19.57■□□□□ 0.72
PTCD3-203ENST00000409783 RAI1Q7Z5J4 1906 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-203ENST00000409783 A0A096LPE4 126 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 ARPC4-TTLL3A0A0A6YYG9 625 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 A0A1W2PPZ6 126 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 DPRXA6NFQ7 191 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 SEC14L2O76054 403 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 CCNB2O95067 398 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 GASTP01350 101 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 IST1P53990 364 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 TSPAN31Q12999 210 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 GK3PQ14409 553 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 MICAQ29983 383 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 C1orf146Q5VVC0 180 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 ARIH2OSQ8N7S6 290 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 SYT14Q8NB59 555 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 MCHR2Q969V1 340 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 DUS3LQ96G46 650 aaKnown RBP19.56■□□□□ 0.72
PTCD3-203ENST00000409783 NGBQ9NPG2 151 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 STX18Q9P2W9 335 aaKnown RBP19.56■□□□□ 0.72
PTCD3-203ENST00000409783 IL20RAQ9UHF4 553 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 LRBAP50851 2863 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 ROS1P08922 2347 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 NAV2Q8IVL1 2488 aa19.56■□□□□ 0.72
PTCD3-203ENST00000409783 DHHO43323 396 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 QDPRP09417 244 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 HOXB1P14653 301 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-203ENST00000409783 RPL4P36578 427 aaKnown RBP19.55■□□□□ 0.72
PTCD3-203ENST00000409783 ACVR1BP36896 505 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 CLRN1P58418 232 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 FAM205BPQ63HN1 556 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 SMARCD3Q6STE5 483 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 NRGNQ92686 78 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 Q96M85 177 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 OR52D1Q9H346 318 aa19.55■□□□□ 0.72
PTCD3-203ENST00000409783 OBP2BQ9NPH6 170 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms