RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CADP27708 2225 aa17.4■□□□□ 0.38
PDLIM2-207ENST00000409417 ANKRD17O75179 2603 aaKnown RBP17.39■□□□□ 0.38
PDLIM2-207ENST00000409417 PDZD2O15018 2839 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 A0A1W2PPR1 153 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF99A8MXY4 864 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 CENPBD1B2RD01 187 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 EBAG9O00559 213 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 RUNX1T1Q06455 604 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 TBRG1Q3YBR2 411 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 HIKESHIQ53FT3 197 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 ASRGL1Q7L266 308 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 OR4C15Q8NGM1 316 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 MAGEE2Q8TD90 523 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 PLPPR2Q96GM1 343 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 RSRC1Q96IZ7 334 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 HS3ST6Q96QI5 342 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 GPA33Q99795 319 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 NDEL1Q9GZM8 345 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 ESRP2Q9H6T0 727 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 AMDHD2Q9Y303 409 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 CSMD2Q7Z408 3487 aa17.39■□□□□ 0.37
PDLIM2-207ENST00000409417 CSMD1Q96PZ7 3565 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 CREBBPQ92793 2442 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 A0A1W2PR80 420 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 UNC119BA6NIH7 251 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 IGHMP01871 453 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 HOXB1P14653 301 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF26P17031 533 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 FPR3P25089 353 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 CTXN1P60606 82 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 RPL27P61353 136 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 HIST3H3Q16695 136 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 LRFN4Q6PJG9 635 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 KLHL24Q6TFL4 600 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 IGFN1Q86VF2 1251 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 LINC00471Q8N535 108 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 PLEKHF2Q9H8W4 249 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 REEP1Q9H902 201 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 NPAP1Q9NZP6 1156 aa17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 SAMHD1Q9Y3Z3 626 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-207ENST00000409417 A0A096LPE4 126 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 A0A1W2PPZ6 126 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 WNT11O96014 354 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 CD14P08571 375 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 ACADSP16219 412 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 RPL4P36578 427 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 CLRN1P58418 232 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 TOP3AQ13472 1001 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 NCMAPQ5T1S8 102 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 FAM205BPQ63HN1 556 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 C1orf94Q6P1W5 598 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF627Q7L945 461 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 NELFAQ9H3P2 528 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF346Q9UL40 294 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 POFUT2Q9Y2G5 429 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 MAGED1Q9Y5V3 778 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 ARPC4-TTLL3A0A0A6YYG9 625 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 TRMUO75648 421 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 NDUFB2O95178 105 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 UBE2NP61088 152 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 GK3PQ14409 553 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF770Q6IQ21 691 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 PGBD2Q6P3X8 592 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 CCDC36Q8IYA8 594 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 SYT14Q8NB59 555 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 NOXO1Q8NFA2 376 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 GPX7Q96SL4 187 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 TMEM204Q9BSN7 226 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 KATNB1Q9BVA0 655 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 YY1AP1Q9H869 796 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 CCM2LQ9NUG4 571 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 VNN3Q9NY84 501 aa17.37■□□□□ 0.37
PDLIM2-207ENST00000409417 DPRXA6NFQ7 191 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 A6NIZ1 184 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 CCNB2O95067 398 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 CST1P01037 141 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 QDPRP09417 244 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 PAX7P23759 505 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 GSSP48637 474 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 RAP1BP61224 184 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 RAP1AP62834 184 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 ERVK-25P63136 954 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 BSPH1Q075Z2 132 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 C1orf146Q5VVC0 180 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 KLHL17Q6TDP4 642 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 ARIH2OSQ8N7S6 290 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 PAPD5Q8NDF8 572 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF519Q8TB69 540 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 GNPDA2Q8TDQ7 276 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 MCHR2Q969V1 340 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 TSPAN32Q96QS1 320 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 KCNK17Q96T54 332 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 GRHPRQ9UBQ7 328 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 ADAM18Q9Y3Q7 739 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 U3KQV3 271 aa17.36■□□□□ 0.37
PDLIM2-207ENST00000409417 DHHO43323 396 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 NR2C1P13056 603 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 ACVR1BP36896 505 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 ERFP50548 548 aa17.35■□□□□ 0.37
PDLIM2-207ENST00000409417 ZNF83P51522 516 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms