RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ZNF611Q8N823 705 aa18.21■□□□□ 0.51
PDGFA-204ENST00000405692 OR4K5Q8NGD3 323 aa18.21■□□□□ 0.51
PDGFA-204ENST00000405692 OR52J3Q8NH60 311 aa18.21■□□□□ 0.51
PDGFA-204ENST00000405692 OR51A7Q8NH64 312 aa18.21■□□□□ 0.51
PDGFA-204ENST00000405692 ASB10Q8WXI3 467 aa18.21■□□□□ 0.51
PDGFA-204ENST00000405692 FBXW5Q969U6 566 aa18.21■□□□□ 0.51
PDGFA-204ENST00000405692 CCDC124Q96CT7 223 aaKnown RBP18.21■□□□□ 0.51
PDGFA-204ENST00000405692 FOXC2Q99958 501 aa18.21■□□□□ 0.51
PDGFA-204ENST00000405692 C1QTNF6Q9BXI9 259 aa18.21■□□□□ 0.51
PDGFA-204ENST00000405692 BEX4Q9NWD9 120 aaPredicted RBP18.21■□□□□ 0.51
PDGFA-204ENST00000405692 ABCA4P78363 2273 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 TRAV27A0A087WT01 109 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 TRBV4-1A0A0J9YWV2 114 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 TMCC2O75069 709 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 HOXB6P17509 224 aaKnown RBP18.2■□□□□ 0.5
PDGFA-204ENST00000405692 CD53P19397 219 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 ART1P52961 327 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 CTXN1P60606 82 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 MS4A2Q01362 244 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 DEFB113Q30KQ7 82 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 C3orf36Q3SXR2 165 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 ZNF813Q6ZN06 617 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 PIAS4Q8N2W9 510 aaPredicted RBP18.2■□□□□ 0.5
PDGFA-204ENST00000405692 FAM169BQ8N8A8 192 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 NOXO1Q8NFA2 376 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 OR13C2Q8NGS9 318 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 FNDC8Q8TC99 324 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 NANOS1Q8WY41 292 aaKnown RBP18.2■□□□□ 0.5
PDGFA-204ENST00000405692 ZNF837Q96EG3 531 aaPredicted RBP18.2■□□□□ 0.5
PDGFA-204ENST00000405692 FAM46AQ96IP4 442 aaKnown RBP18.2■□□□□ 0.5
PDGFA-204ENST00000405692 ALPK1Q96QP1 1244 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 TNFRSF13CQ96RJ3 184 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 CCL19Q99731 98 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 FOXB1Q99853 325 aa18.2■□□□□ 0.5
PDGFA-204ENST00000405692 PDZD2O15018 2839 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 TCRBV5S2A0A599 114 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 SH3PXD2BA1X283 911 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 DNAJC8O75937 253 aaPredicted RBP18.19■□□□□ 0.5
PDGFA-204ENST00000405692 IGHMP01871 453 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 RRM2P31350 389 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 RPL4P36578 427 aaKnown RBP18.19■□□□□ 0.5
PDGFA-204ENST00000405692 CAPZA2P47755 286 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 ZNF84P51523 738 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 RPL27P61353 136 aaKnown RBP18.19■□□□□ 0.5
PDGFA-204ENST00000405692 BNIP1Q12981 228 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 ZNF672Q499Z4 452 aaPredicted RBP18.19■□□□□ 0.5
PDGFA-204ENST00000405692 ARMC4Q5T2S8 1044 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 SLC22A25Q6T423 547 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 LINC00471Q8N535 108 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 SLC7A6OSQ96CW6 309 aaPredicted RBP18.19■□□□□ 0.5
PDGFA-204ENST00000405692 CLPTM1LQ96KA5 538 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 KCNS3Q9BQ31 491 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 MRPL13Q9BYD1 178 aaKnown RBP18.19■□□□□ 0.5
PDGFA-204ENST00000405692 NELFAQ9H3P2 528 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 FAIMQ9NVQ4 179 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 POU2F3Q9UKI9 436 aa18.19■□□□□ 0.5
PDGFA-204ENST00000405692 ANKRD17O75179 2603 aaKnown RBP18.18■□□□□ 0.5
PDGFA-204ENST00000405692 A6NIZ1 184 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 CDC42EP2O14613 210 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 DHHO43323 396 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 MGRN1O60291 552 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 TRMUO75648 421 aaKnown RBP18.18■□□□□ 0.5
PDGFA-204ENST00000405692 QDPRP09417 244 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 CBR1P16152 277 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 ARR3P36575 388 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 MAGEA2P43356 314 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 OMPP47874 163 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 RAP1BP61224 184 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 RAP1AP62834 184 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 TOP3AQ13472 1001 aaPredicted RBP18.18■□□□□ 0.5
PDGFA-204ENST00000405692 HIST3H3Q16695 136 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 MEX3DQ86XN8 651 aaKnown RBP18.18■□□□□ 0.5
PDGFA-204ENST00000405692 WDFY1Q8IWB7 410 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 KBTBD8Q8NFY9 601 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 SLC38A2Q96QD8 506 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 FUZQ9BT04 418 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 ALG12Q9BV10 488 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 DENND2DQ9H6A0 471 aaPredicted RBP18.18■□□□□ 0.5
PDGFA-204ENST00000405692 CISD1Q9NZ45 108 aaKnown RBP18.18■□□□□ 0.5
PDGFA-204ENST00000405692 CRNNQ9UBG3 495 aaPredicted RBP18.18■□□□□ 0.5
PDGFA-204ENST00000405692 LRBAP50851 2863 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 TACC2O95359 2948 aa18.18■□□□□ 0.5
PDGFA-204ENST00000405692 AQP12BA6NM10 295 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 SHISA9B4DS77 424 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 OR10H3O60404 316 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 NDUFB2O95178 105 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 FARS2O95363 451 aaKnown RBP18.17■□□□□ 0.5
PDGFA-204ENST00000405692 ACVR1BP36896 505 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 LIMS1P48059 325 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 CDH11P55287 796 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 SEC23BQ15437 767 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 NRN1LQ496H8 165 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 LRFN4Q6PJG9 635 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 AQP12AQ8IXF9 295 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 LRRC75AQ8NAA5 344 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 SYT14Q8NB59 555 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 LILRB1Q8NHL6 650 aaPredicted RBP18.17■□□□□ 0.5
PDGFA-204ENST00000405692 TMEM171Q8WVE6 324 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 MCHR2Q969V1 340 aa18.17■□□□□ 0.5
PDGFA-204ENST00000405692 RBP7Q96R05 134 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms