RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 IDSB3KWA1 339 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 PRICKLE3O43900 615 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 UBCP0CG48 685 aaKnown RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF529Q6P280 563 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 ZNF610Q8N9Z0 462 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 GOT1L1Q8NHS2 421 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-204ENST00000400337 NIPAL2Q9H841 368 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 KCND3Q9UK17 655 aa16.71■□□□□ 0.27
COL18A1-204ENST00000400337 PCSK6P29122 969 aa16.71■□□□□ 0.26
COL18A1-204ENST00000400337 CCR5P51681 352 aa16.71■□□□□ 0.26
COL18A1-204ENST00000400337 GLYATL3Q5SZD4 288 aa16.71■□□□□ 0.26
COL18A1-204ENST00000400337 SLC22A24Q8N4F4 322 aa16.71■□□□□ 0.26
COL18A1-204ENST00000400337 LTB4R2Q9NPC1 389 aa16.71■□□□□ 0.26
COL18A1-204ENST00000400337 SLC34A2O95436 690 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 CHRNB1P11230 501 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 SRMP19623 302 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 RPS19P39019 145 aaKnown RBP16.7■□□□□ 0.26
COL18A1-204ENST00000400337 ETV1P50549 477 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 FBXL6Q8N531 539 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 DYNLRB1Q9NP97 96 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 EDARQ9UNE0 448 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 F5P12259 2224 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 M0R082 166 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 PAPLNO95428 1278 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 SBK2P0C263 348 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF93P35789 620 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-204ENST00000400337 RAP2BP61225 183 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 RPL27P61353 136 aaKnown RBP16.7■□□□□ 0.26
COL18A1-204ENST00000400337 OR2A1Q8NGT9 310 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 ZMAT3Q9HA38 289 aaKnown RBP16.7■□□□□ 0.26
COL18A1-204ENST00000400337 CTGFP29279 349 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 CASP3P42574 277 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 CA13Q8N1Q1 262 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 EMC6Q9BV81 110 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 NUP205Q92621 2012 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 TCRBV5S2A0A599 114 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 MCRIP1C9JLW8 97 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 FXYD1O00168 92 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 LINC00615Q96LM1 132 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-204ENST00000400337 PSD2Q9BQI7 771 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 ECM29Q5VYK3 1845 aa16.7■□□□□ 0.26
COL18A1-204ENST00000400337 SRFP11831 508 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 BPHLQ86WA6 291 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-204ENST00000400337 OR6V1Q8N148 313 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 C22orf15Q8WYQ4 148 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 FAM3DQ96BQ1 224 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 DCLRE1CQ96SD1 692 aaKnown RBP16.69■□□□□ 0.26
COL18A1-204ENST00000400337 C11orf54Q9H0W9 315 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-204ENST00000400337 STEAP1Q9UHE8 339 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 A0A1W2PPC4 97 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 PRKNO60260 465 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-204ENST00000400337 PRAMEF4O60810 478 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 SLC2A10O95528 541 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 SLC2A1P11166 492 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 METAP1P53582 386 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 DUSP8Q13202 625 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF620Q6ZNG0 422 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 SIAH3Q8IW03 269 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 TSLPQ969D9 159 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 SDSLQ96GA7 329 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 HINT3Q9NQE9 182 aaKnown RBP16.69■□□□□ 0.26
COL18A1-204ENST00000400337 MUTYHQ9UIF7 546 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 APEHP13798 732 aaKnown RBP16.69■□□□□ 0.26
COL18A1-204ENST00000400337 CD53P19397 219 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 MRPL19P49406 292 aaKnown RBP16.69■□□□□ 0.26
COL18A1-204ENST00000400337 ACTBL2Q562R1 376 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 Q6ZTK2 550 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF780AO75290 641 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-204ENST00000400337 EDN3P14138 238 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 CAPZBP47756 277 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 CCL11P51671 97 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 LTC4SQ16873 150 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 CELF2-AS1Q8N7Q2 184 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 OR14K1Q8NGZ2 314 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 IFI44Q8TCB0 444 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 STT3BQ8TCJ2 826 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 PAQR8Q8TEZ7 354 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 PFDN5Q99471 154 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 TEX101Q9BY14 249 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 SEMA4CQ9C0C4 833 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 CHRNA9Q9UGM1 479 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 GPR160Q9UJ42 338 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 TRAPPC2LQ9UL33 140 aa16.69■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF587BE7ETH6 402 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 UPK1AO00322 258 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 NRG2O14511 850 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 TCTN3Q6NUS6 607 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF436Q9C0F3 470 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 PCDHB10Q9UN67 800 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 GPR55Q9Y2T6 319 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-204ENST00000400337 KIAA1551Q9HCM1 1747 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 TMEM129A0AVI4 362 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF814B7Z6K7 855 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 MT-CO2P00403 227 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF136P52737 540 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 FAM26EQ8N5C1 309 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 TMEM99Q8N816 258 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 SPNS1Q9H2V7 528 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 RNF167Q9H6Y7 350 aa16.68■□□□□ 0.26
COL18A1-204ENST00000400337 ACOXLQ9NUZ1 547 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms