RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 SS18L1O75177 396 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 CRHP06850 196 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 NR2C1P13056 603 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 HIST1H1CP16403 213 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 EIF1AXP47813 144 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 TPD52P55327 224 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 ERVK-25P63136 954 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 ITGADQ13349 1161 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 KRR1Q13601 381 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 GGTLC2Q14390 218 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 SNAPC1Q16533 368 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 MESTQ5EB52 335 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 CLEC12AQ5QGZ9 265 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 RNLSQ5VYX0 342 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 FOXL2NBQ6ZUU3 175 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 ANKRD13BQ86YJ7 626 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 TMEM123Q8N131 208 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 MBD3L2Q8NHZ7 208 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 SMPDL3BQ92485 455 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 SNRNP40Q96DI7 357 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 ZFP3Q96NJ6 502 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 CNTNAP3BQ96NU0 1288 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 CNTNAP3Q9BZ76 1288 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 WDR12Q9GZL7 423 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 MARCH7Q9H992 704 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 TVP23BQ9NYZ1 205 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 CNOT2Q9NZN8 540 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 EMC3Q9P0I2 261 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 KLHL9Q9P2J3 617 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 MOKQ9UQ07 419 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 FLVCR1Q9Y5Y0 555 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 APC2O95996 2303 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 TEX13CA0A0J9YWL9 993 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 IRGMA1A4Y4 181 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 PRSS37A4D1T9 235 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 CCDC182A6NF36 153 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 SNTNA6NMZ2 147 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 BCL10O95999 233 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 F13BP05160 661 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 PGA4P0DJD7 388 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 PGA3P0DJD8 388 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 ZNF43P17038 809 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 PAICSP22234 425 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 HTR1FP30939 366 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 PTGS2P35354 604 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 IL5RAQ01344 420 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 ZNF846Q147U1 533 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 ACSF3Q4G176 576 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 TMEM225Q6GV28 225 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 C19orf48Q6RUI8 117 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 KCTD8Q6ZWB6 473 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 CCDC103Q8IW40 242 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 C20orf196Q8IYI0 205 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 ZNF786Q8N393 782 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 ST6GALNAC3Q8NDV1 305 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 IPCEF1Q8WWN9 437 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 SLC25A44Q96H78 314 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 GMPPAQ96IJ6 420 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 ZNF845Q96IR2 970 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 Q96M85 177 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 ZNF582Q96NG8 517 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 AKIP1Q9NQ31 210 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 WARS2Q9UGM6 360 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 FOXD3Q9UJU5 478 aaPredicted RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 CAMK2AQ9UQM7 478 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 EXOGQ9Y2C4 368 aaKnown RBP6.09□□□□□ -1.43
USP16-203ENST00000399975 FKBP7Q9Y680 259 aa6.09□□□□□ -1.43
USP16-203ENST00000399975 SPTBN4Q9H254 2564 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 RAMP1O60894 148 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 WISP2O76076 250 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 RENP00797 406 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 OPN1LWP04000 364 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 HLA-DOBP13765 273 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 IFNGR1P15260 489 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 KLK2P20151 261 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 TIMP3P35625 211 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 ACVR1BP36896 505 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 CDKN2AP42771 156 aaKnown RBP6.09□□□□□ -1.44
USP16-203ENST00000399975 BLVRAP53004 296 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 CDH15P55291 814 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 RASGEF1BQ0VAM2 473 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 C1DQ13901 141 aaKnown RBP6.09□□□□□ -1.44
USP16-203ENST00000399975 GXYLT1Q4G148 440 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 THEM4Q5T1C6 240 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 C10orf128Q5T292 105 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 OR2A2Q6IF42 318 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 NIPAL3Q6P499 406 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 MEPCEQ7L2J0 689 aaKnown RBP6.09□□□□□ -1.44
USP16-203ENST00000399975 CHMP1BQ7LBR1 199 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 CXXC5Q7LFL8 322 aaKnown RBP6.09□□□□□ -1.44
USP16-203ENST00000399975 PRSS48Q7RTY5 328 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 JAZF1Q86VZ6 243 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 CISD2Q8N5K1 135 aaKnown RBP6.09□□□□□ -1.44
USP16-203ENST00000399975 TCEANCQ8N8B7 351 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 NOXO1Q8NFA2 376 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 PTP4A1Q93096 173 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 RFKQ969G6 155 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 MUL1Q969V5 352 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 BOD1Q96IK1 185 aa6.09□□□□□ -1.44
USP16-203ENST00000399975 OR2M2Q96R28 347 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms