RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 JMJD6Q6NYC1 403 aaPredicted RBP12.72□□□□□ -0.37
APOB-202ENST00000399256 FBXO42Q6P3S6 717 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 ANKRD16Q6P6B7 361 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 ZNF676Q8N7Q3 588 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 WNT2BQ93097 391 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 TSNAXQ99598 290 aaKnown RBP12.72□□□□□ -0.37
APOB-202ENST00000399256 VRK1Q99986 396 aaPredicted RBP12.72□□□□□ -0.37
APOB-202ENST00000399256 PHPT1Q9NRX4 125 aaPredicted RBP12.72□□□□□ -0.37
APOB-202ENST00000399256 SERGEFQ9UGK8 458 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 M0QYG6 137 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 TACSTD2P09758 323 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 LIPCP11150 499 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 CSF2RBP32927 897 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 PRSS3P35030 304 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 POU3F4P49335 361 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 TAF13Q15543 124 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 SLC6A19Q695T7 634 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 LILRB1Q8NHL6 650 aaPredicted RBP12.72□□□□□ -0.37
APOB-202ENST00000399256 MNTQ99583 582 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 LMAN2LQ9H0V9 348 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 SRA1Q9HD15 236 aaKnown RBP12.72□□□□□ -0.37
APOB-202ENST00000399256 ERVK-19Q9WJR5 959 aa12.72□□□□□ -0.37
APOB-202ENST00000399256 A0A0D9SG52 128 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 TRBV5-5A0A0J9YX44 114 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 TMEM82A0PJX8 343 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 OR5H14A6NHG9 310 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 BLOC1S5-TXNDC5H3BN57 136 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 H7C1C5 153 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 CTSVO60911 334 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 TMEM127O75204 238 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 ATG12O94817 140 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 IGKV1D-16P01601 117 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 CEACAM5P06731 702 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 GP1BAP07359 652 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 EPCAMP16422 314 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 CSRP1P21291 193 aaKnown RBP12.71□□□□□ -0.37
APOB-202ENST00000399256 LCN6P62502 163 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 PRICKLE4Q2TBC4 344 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 ULK3Q6PHR2 472 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 CBLN2Q8IUK8 224 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 SLC43A2Q8N370 569 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 OR1J2Q8NGS2 313 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 RAB7BQ96AH8 199 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 SEC22AQ96IW7 307 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 TIMM29Q9BSF4 260 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 PTDSS2Q9BVG9 487 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 KCNJ13O60928 360 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 FGF19O95750 216 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 EML2O95834 649 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 OTPQ5XKR4 325 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 HAGHLQ6PII5 290 aaPredicted RBP12.71□□□□□ -0.37
APOB-202ENST00000399256 LINC00114Q6XXX2 140 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 DGAT2L6Q6ZPD8 337 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 PUSL1Q8N0Z8 303 aaKnown RBP12.71□□□□□ -0.37
APOB-202ENST00000399256 GABRG1Q8N1C3 465 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 OR52R1Q8NGF1 315 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 OR1S2Q8NGQ3 325 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 NT5CQ8TCD5 201 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 PDCD10Q9BUL8 212 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 ASF1BQ9NVP2 202 aa12.71□□□□□ -0.37
APOB-202ENST00000399256 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 RAD1O60671 282 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 SLC25A12O75746 678 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 AGTR1P30556 359 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 PPIAP62937 165 aaKnown RBP12.71□□□□□ -0.38
APOB-202ENST00000399256 SERTAD2Q14140 314 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 GUCA2BQ16661 112 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 GLT8D1Q68CQ7 371 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 RNF44Q7L0R7 432 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 JAZF1Q86VZ6 243 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 CLEC1AQ8NC01 280 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 RSPH9Q9H1X1 276 aaPredicted RBP12.71□□□□□ -0.38
APOB-202ENST00000399256 ATG5Q9H1Y0 275 aa12.71□□□□□ -0.38
APOB-202ENST00000399256 MTIF3Q9H2K0 278 aaKnown RBP12.71□□□□□ -0.38
APOB-202ENST00000399256 A0A087WV62 115 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 OR2W5A6NFC9 320 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 PMS2P2O95744 297 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 WNT11O96014 354 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 ITGB2P05107 769 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 CTNNB1P35222 781 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 AQP2P41181 271 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 MGAT2Q10469 447 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 HFEQ30201 348 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 AGBL4Q5VU57 503 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 NDUFAF7Q7L592 441 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 SLC16A9Q7RTY1 509 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 LDLRAD3Q86YD5 345 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 GALNT16Q8N428 558 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 CCDC107Q8WV48 283 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 ASB12Q8WXK4 309 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 LMF1Q96S06 567 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.7□□□□□ -0.38
APOB-202ENST00000399256 TINAGL1Q9GZM7 467 aaPredicted RBP12.7□□□□□ -0.38
APOB-202ENST00000399256 IFT22Q9H7X7 185 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 NDRG3Q9UGV2 375 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 PCDHB10Q9UN67 800 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 EML5Q05BV3 1969 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 DENND4AQ7Z401 1863 aa12.7□□□□□ -0.38
APOB-202ENST00000399256 DCTN6O00399 190 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms