RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 BEND4Q6ZU67 534 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 GABRG1Q8N1C3 465 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ASB10Q8WXI3 467 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 MBD6Q96DN6 1003 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 CENPNQ96H22 339 aaPredicted RBP22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ALKBH3Q96Q83 286 aaPredicted RBP22.39■■□□□ 1.17
U2AF1-203ENST00000398137 NIPSNAP1Q9BPW8 284 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 KATNB1Q9BVA0 655 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 TMUB1Q9BVT8 246 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 OR52D1Q9H346 318 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 MALT1Q9UDY8 824 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ZFHX3Q15911 3703 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF726A6NNF4 738 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 ERVK-25P63136 954 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 TAF11Q15544 211 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 Q6ZT83 130 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 NRBF2Q96F24 287 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 TXNIPQ9H3M7 391 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 EGLN3Q9H6Z9 239 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 UPB1Q9UBR1 384 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 ADAM18Q9Y3Q7 739 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 CDH10Q9Y6N8 788 aa22.38■■□□□ 1.17
U2AF1-203ENST00000398137 SAC3D1A6NKF1 404 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 DEFB108AA8MXU0 73 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 UPK3AO75631 287 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 KRT33AO76009 404 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 SOX14O95416 240 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 IGHMP01871 453 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 DNASE1P24855 282 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 UGT2B10P36537 528 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 FAPQ12884 760 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 ANKRD34AQ69YU3 496 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF771Q7L3S4 317 aaPredicted RBP22.37■■□□□ 1.17
U2AF1-203ENST00000398137 CXorf67Q86X51 503 aaPredicted RBP22.37■■□□□ 1.17
U2AF1-203ENST00000398137 ATG16L2Q8NAA4 619 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 POMGNT2Q8NAT1 580 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 ICA1LQ8NDH6 482 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 OR6X1Q8NH79 312 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 SAMD8Q96LT4 415 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 ADAD1Q96M93 576 aaKnown RBP22.37■■□□□ 1.17
U2AF1-203ENST00000398137 TSPAN32Q96QS1 320 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 ELOVL5Q9NYP7 299 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 KIF17Q9P2E2 1029 aa22.37■■□□□ 1.17
U2AF1-203ENST00000398137 NPIPB13A6NJU9 1138 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 NPIPB4C9JG80 1138 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 CNOT4O95628 575 aaKnown RBP22.36■■□□□ 1.17
U2AF1-203ENST00000398137 RAF1P04049 648 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 CD14P08571 375 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 GSTM3P21266 225 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 RPL27P61353 136 aaKnown RBP22.36■■□□□ 1.17
U2AF1-203ENST00000398137 RUNX1T1Q06455 604 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 ARMC4Q5T2S8 1044 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 FBXW10Q5XX13 1052 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 RASSF6Q6ZTQ3 369 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 HIPK1Q86Z02 1210 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 TGIF2LYQ8IUE0 185 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 GPR137CQ8N3F9 429 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 GPX7Q96SL4 187 aaPredicted RBP22.36■■□□□ 1.17
U2AF1-203ENST00000398137 ASB6Q9NWX5 421 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 NDRG3Q9UGV2 375 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF346Q9UL40 294 aaKnown RBP22.36■■□□□ 1.17
U2AF1-203ENST00000398137 OAZ3Q9UMX2 235 aa22.36■■□□□ 1.17
U2AF1-203ENST00000398137 MAP1AP78559 2803 aaPredicted RBP22.36■■□□□ 1.17
U2AF1-203ENST00000398137 OR6C65A6NJZ3 312 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 G3V2T6 193 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 M0R3G1 203 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 PPP1R3DO95685 299 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 IGFBP1P08833 259 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-203ENST00000398137 IGHV1-2P23083 117 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 SLC6A6P31641 620 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 FOXG1P55316 489 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-203ENST00000398137 TSC22D1Q15714 1073 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 RFX4Q33E94 735 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 C9orf135Q5VTT2 229 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 KLHL17Q6TDP4 642 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 STAC2Q6ZMT1 411 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 LINGO2Q7L985 606 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 HDDC2Q7Z4H3 204 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 ZDHHC13Q8IUH4 622 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 C20orf196Q8IYI0 205 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 SVOPLQ8N434 492 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 NOXO1Q8NFA2 376 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 OR6N1Q8NGY5 312 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF566Q969W8 418 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 SLC25A44Q96H78 314 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-203ENST00000398137 PLA2G12AQ9BZM1 189 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 LINC00470Q9BZP3 86 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF556Q9HAH1 456 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 MTORP42345 2549 aa22.35■■□□□ 1.17
U2AF1-203ENST00000398137 C2CD3Q4AC94 2353 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 ALPK2Q86TB3 2170 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF587BE7ETH6 402 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 LYZL6O75951 148 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 IGHG1P01857 330 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 PGA4P0DJD7 388 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 PGA3P0DJD8 388 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 ANXA8P13928 327 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 CD53P19397 219 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 COX5AP20674 150 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 LOXP28300 417 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms