RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 FAHD2AQ96GK7 314 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 SLC41A3Q96GZ6 507 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 TMEM19Q96HH6 336 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 ITCHQ96J02 903 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 LRRC37BQ96QE4 947 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 RBM4Q9BWF3 364 aaKnown RBP7.51□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF416Q9BWM5 594 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 TPK1Q9H3S4 243 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 RMND5AQ9H871 391 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 SLC6A13Q9NSD5 602 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 TREM2Q9NZC2 230 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 SEC14L4Q9UDX3 406 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 GPR160Q9UJ42 338 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 HIF3AQ9Y2N7 669 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
CAPN3-208ENST00000397204 WNK2Q9Y3S1 2297 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 A0A087WUJ7 227 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 HDAC3O15379 428 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 RGS16O15492 202 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-208ENST00000397204 PPIHO43447 177 aaKnown RBP7.5□□□□□ -1.21
CAPN3-208ENST00000397204 TRAF3IP2O43734 574 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-208ENST00000397204 ENTPD5O75356 428 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 RAB36O95755 333 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 SERPINA5P05154 406 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 IDO1P14902 403 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 ETS2P15036 469 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 NQO1P15559 274 aaKnown RBP7.5□□□□□ -1.21
CAPN3-208ENST00000397204 BGNP21810 368 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 EPHA3P29320 983 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 LSP1P33241 339 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 ALDH3B1P43353 468 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 LIMS1P48059 325 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 GIPRP48546 466 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 ARFIP2P53365 341 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 SEC24CP53992 1094 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 AQP5P55064 265 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 SELENOVP59797 346 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 HILS1P60008 231 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 HOXC5Q00444 222 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 PIGFQ07326 219 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 RGNQ15493 299 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 FXNQ16595 210 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 RPS26P11Q5JNZ5 115 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-208ENST00000397204 PHYHD1Q5SRE7 291 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 FAM91A1Q658Y4 838 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 PIWIL3Q7Z3Z3 882 aaKnown RBP7.5□□□□□ -1.21
CAPN3-208ENST00000397204 LRP11Q86VZ4 500 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 SCAIQ8N9R8 606 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 SLC47A1Q96FL8 570 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 EPYCQ99645 322 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 SYT3Q9BQG1 590 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 RAD21L1Q9H4I0 556 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 WDR55Q9H6Y2 383 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-208ENST00000397204 A4GALTQ9NPC4 353 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 SLC52A3Q9NQ40 469 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF275Q9NSD4 429 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-208ENST00000397204 DUSP13Q9UII6 198 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 DYSFO75923 2080 aa7.5□□□□□ -1.21
CAPN3-208ENST00000397204 IGKV1D-42A0A075B6H8 117 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 A0A1B0GWA3 101 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 SLC22A23A1A5C7 686 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 J3QLI3 93 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 CLIC1O00299 241 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 WNT9BO14905 357 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 RP2O75695 350 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 SEC14L2O76054 403 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 UBL3O95164 117 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 PNPP00491 289 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 HPRP00739 348 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 HLA-DOBP13765 273 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 PRKAR1BP31321 381 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 PTDSS1P48651 473 aaKnown RBP7.49□□□□□ -1.21
CAPN3-208ENST00000397204 VSNL1P62760 191 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 BST1Q10588 318 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 FADDQ13158 208 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 PMS2P3Q13401 168 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 MPP2Q14168 576 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 MOGQ16653 247 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 PCGF3Q3KNV8 242 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 KRT71Q3SY84 523 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 ALG10BQ5I7T1 473 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 CARD17Q5XLA6 110 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 PXKQ7Z7A4 578 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 OR6N1Q8NGY5 312 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 BBS10Q8TAM1 723 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 AENQ8WTP8 325 aaKnown RBP7.49□□□□□ -1.21
CAPN3-208ENST00000397204 YIPF5Q969M3 257 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 TXNDC15Q96J42 360 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 FOXB1Q99853 325 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 EMC6Q9BV81 110 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 SUCNR1Q9BXA5 334 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 ULBP2Q9BZM5 246 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 NARFLQ9H6Q4 476 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 LPAR2Q9HBW0 351 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 KCNK9Q9NPC2 374 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 G6PC2Q9NQR9 355 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 SLCO1C1Q9NYB5 712 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 MRPL39Q9NYK5 338 aaKnown RBP7.49□□□□□ -1.21
CAPN3-208ENST00000397204 NKIRAS2Q9NYR9 191 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF224Q9NZL3 707 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms