RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 RADILQ96JH8 1075 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 LINC00470Q9BZP3 86 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 MRPL39Q9NYK5 338 aaKnown RBP12.79□□□□□ -0.36
SEC13-208ENST00000397109 MGAT4BQ9UQ53 548 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 AMDHD2Q9Y303 409 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 MAGED1Q9Y5V3 778 aaPredicted RBP12.79□□□□□ -0.36
SEC13-208ENST00000397109 SLC25A15Q9Y619 301 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 HSPE1-MOB4S4R3N1 261 aa12.79□□□□□ -0.36
SEC13-208ENST00000397109 HEATR1Q9H583 2144 aaKnown RBP12.79□□□□□ -0.36
SEC13-208ENST00000397109 DPPA5A6NC42 116 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 TRIM64A6NGJ6 449 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 ZNF587BE7ETH6 402 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SNAP29O95721 258 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 MT-ATP6P00846 226 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 BGLAPP02818 100 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 RHCEP18577 417 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 CBLP22681 906 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 PAX7P23759 505 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SELENOPP49908 381 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 FOXG1P55316 489 aaPredicted RBP12.78□□□□□ -0.36
SEC13-208ENST00000397109 CLDN17P56750 224 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 MYBPC1Q00872 1141 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 IL1RL1Q01638 556 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 BSPH1Q075Z2 132 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 C9orf135Q5VTT2 229 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SHEQ5VZ18 495 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 TTC33Q6PID6 262 aaPredicted RBP12.78□□□□□ -0.36
SEC13-208ENST00000397109 TMEM108Q6UXF1 575 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 TSPYL5Q86VY4 417 aaPredicted RBP12.78□□□□□ -0.36
SEC13-208ENST00000397109 C10orf53Q8N6V4 93 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 OR52N5Q8NH56 324 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 CYGBQ8WWM9 190 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 BOD1Q96IK1 185 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 PRRC1Q96M27 445 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SLC19A3Q9BZV2 496 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SLC17A5Q9NRA2 495 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 NDUFAF4Q9P032 175 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 B3GAT1Q9P2W7 334 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 ENOPH1Q9UHY7 261 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SAMHD1Q9Y3Z3 626 aaKnown RBP12.78□□□□□ -0.36
SEC13-208ENST00000397109 FAM32AQ9Y421 112 aaKnown RBP12.78□□□□□ -0.36
SEC13-208ENST00000397109 ENPP4Q9Y6X5 453 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 ARRDC5A6NEK1 342 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SLC43A1O75387 559 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 CLPTM1O96005 669 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 WNT11O96014 354 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 ANXA8P13928 327 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 PTAFRP25105 342 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 RPL5P46777 297 aaKnown RBP12.78□□□□□ -0.36
SEC13-208ENST00000397109 SMIM11AP58511 58 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 PRPS1P60891 318 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 ADAM8P78325 824 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 NKX6-1P78426 367 aaPredicted RBP12.78□□□□□ -0.36
SEC13-208ENST00000397109 PMS2P3Q13401 168 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 KDM4DQ6B0I6 523 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 KLHL24Q6TFL4 600 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 UEVLDQ8IX04 471 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 ANKK1Q8NFD2 765 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 TMEM171Q8WVE6 324 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 FBXW5Q969U6 566 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 CXorf56Q9H5V9 222 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 OBP2BQ9NPH6 170 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 FAM118AQ9NWS6 357 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SEC14L4Q9UDX3 406 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 SLC7A7Q9UM01 511 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 A4GNTQ9UNA3 340 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 NOX1Q9Y5S8 564 aa12.78□□□□□ -0.36
SEC13-208ENST00000397109 PLCE1Q9P212 2302 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 USF3Q68DE3 2245 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 SMIM31A0A1B0GVY4 71 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 MS4A18H0YCH9 400 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 ZNF432O94892 652 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 OR5F1O95221 314 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 LYPD3O95274 346 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 CD99P14209 185 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 SH3BGRP55822 239 aaPredicted RBP12.77□□□□□ -0.37
SEC13-208ENST00000397109 LTBQ06643 244 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 PUDPQ08623 228 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 MS4A18Q3C1V0 323 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 ZNF672Q499Z4 452 aaPredicted RBP12.77□□□□□ -0.37
SEC13-208ENST00000397109 DEF8Q6ZN54 512 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 OFCC1Q8IZS5 231 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 WDR31Q8NA23 367 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 SETD9Q8NE22 299 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 PIK3C3Q8NEB9 887 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 OR5J2Q8NH18 312 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 MOGAT1Q96PD6 335 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 NPAP1Q9NZP6 1156 aa12.77□□□□□ -0.37
SEC13-208ENST00000397109 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 hCG_2039718K7EN88 272 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 TNFRSF11BO00300 401 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 PLPP3O14495 311 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 FFAR1O14842 300 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 TRAF3IP2O43734 574 aaPredicted RBP12.76□□□□□ -0.37
SEC13-208ENST00000397109 OR6A2O95222 327 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 THY1P04216 161 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
SEC13-208ENST00000397109 IFNA8P32881 189 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms