RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 UTP23Q9BRU9 249 aaKnown RBP13.76□□□□□ -0.21
MCF2L-205ENST00000397017 CHIAQ9BZP6 476 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 TMEM129A0AVI4 362 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 HOXD12P35452 270 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 GALEQ14376 348 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.76□□□□□ -0.21
MCF2L-205ENST00000397017 STEAP3Q658P3 488 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 NDUFAF7Q7L592 441 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 ABHD12BQ7Z5M8 362 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-205ENST00000397017 TMEM41AQ96HV5 264 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 ULBP2Q9BZM5 246 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 MRPS18BQ9Y676 258 aaKnown RBP13.76□□□□□ -0.21
MCF2L-205ENST00000397017 HLA-DOBP13765 273 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 IL11P20809 199 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 DIO1P49895 249 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 SKP2Q13309 424 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 WIPI1Q5MNZ9 446 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-205ENST00000397017 SPINK14Q6IE38 97 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 KLHDC3Q9BQ90 382 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 ATG5Q9H1Y0 275 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 SLC22A11Q9NSA0 550 aa13.76□□□□□ -0.21
MCF2L-205ENST00000397017 SYNGR4O95473 234 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 PIPP12273 146 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-205ENST00000397017 MYBPHQ13203 477 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 EXT1Q16394 746 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 ZNF517Q6ZMY9 492 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-205ENST00000397017 FCRLAQ7L513 359 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 OR5D18Q8NGL1 313 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 DEFB127Q9H1M4 99 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 POLHQ9Y253 713 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 IGHG1P01857 330 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 PRSS12P56730 875 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 TMEM69Q5SWH9 247 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 DCDC5Q6ZRR9 648 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 RFLNBQ8N5W9 214 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 ROBO4Q8WZ75 1007 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 NAA11Q9BSU3 229 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-205ENST00000397017 CALHM2Q9HA72 323 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 RALGAPA1Q6GYQ0 2036 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 OR6C70A6NIJ9 312 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 SYT7O43581 403 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 CXCL13O43927 109 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 TRIP6Q15654 476 aaKnown RBP13.75□□□□□ -0.21
MCF2L-205ENST00000397017 SCGB2B2Q4G0G5 96 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 C3orf33Q6P1S2 294 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 ZNF100Q8IYN0 542 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 GPR148Q8TDV2 347 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 S100A16Q96FQ6 103 aaKnown RBP13.75□□□□□ -0.21
MCF2L-205ENST00000397017 SLC25A44Q96H78 314 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-205ENST00000397017 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 SPACA5Q96QH8 159 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 SLC22A4Q9H015 551 aa13.75□□□□□ -0.21
MCF2L-205ENST00000397017 UPK1BO75841 260 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 ICAM2P13598 275 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 APEHP13798 732 aaKnown RBP13.74□□□□□ -0.21
MCF2L-205ENST00000397017 NOVA1P51513 510 aaKnown RBP13.74□□□□□ -0.21
MCF2L-205ENST00000397017 ARFRP1Q13795 201 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 CEBPEQ15744 281 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 BCL2L15Q5TBC7 163 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 SSX6Q7RTT6 188 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 MDGA2Q7Z553 956 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 PLCZ1Q86YW0 608 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 PLPP7Q8NBV4 271 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 RTN4RQ9BZR6 473 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 ASH2LQ9UBL3 628 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 WIF1Q9Y5W5 379 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 DNAH14Q0VDD8 3507 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 P2RY10O00398 339 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 BHLHE40O14503 412 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 CCL3P10147 92 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 ZNF84P51523 738 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 NAXDQ8IW45 347 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 PLPP5Q8NEB5 264 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 GCDHQ92947 438 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-205ENST00000397017 TRMT61AQ96FX7 289 aaKnown RBP13.74□□□□□ -0.21
MCF2L-205ENST00000397017 DIABLOQ9NR28 239 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 KLHL9Q9P2J3 617 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 OR6C76A6NM76 312 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 FAM25EA8MYX2 175 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 TNFSF11O14788 317 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 TMPRSS7Q7RTY8 843 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 ZNF227Q86WZ6 799 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 MISPQ8IVT2 679 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 OR52N1Q8NH53 320 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 CT55Q8WUE5 264 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 APOBEC4Q8WW27 367 aaKnown RBP13.74□□□□□ -0.21
MCF2L-205ENST00000397017 RFT1Q96AA3 541 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 FKRPQ9H9S5 495 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 NDUFB11Q9NX14 153 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 ZNF407Q9C0G0 2248 aa13.74□□□□□ -0.21
MCF2L-205ENST00000397017 MN1Q10571 1320 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-205ENST00000397017 A0A1W2PQ72 361 aa13.73□□□□□ -0.21
MCF2L-205ENST00000397017 PMS2P1A4D2B8 440 aa13.73□□□□□ -0.21
MCF2L-205ENST00000397017 DVL2O14641 736 aa13.73□□□□□ -0.21
MCF2L-205ENST00000397017 IL1AP01583 271 aa13.73□□□□□ -0.21
MCF2L-205ENST00000397017 LCATP04180 440 aa13.73□□□□□ -0.21
MCF2L-205ENST00000397017 MAPK3P27361 379 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-205ENST00000397017 CARD18P57730 90 aa13.73□□□□□ -0.21
MCF2L-205ENST00000397017 HSF2Q03933 536 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms