RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 C6orf52Q5T4I8 152 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 DEF8Q6ZN54 512 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 SKA3Q8IX90 412 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 OR6X1Q8NH79 312 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 TMEM255BQ8WV15 326 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 RASSF5Q8WWW0 418 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 MPP4Q96JB8 637 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 DOK1Q99704 481 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 ZNF442Q9H7R0 627 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 GLTPQ9NZD2 209 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 ARMCX1Q9P291 453 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 ZNF229Q9UJW7 825 aa15.82■□□□□ 0.12
FXN-203ENST00000396366 COL6A5A8TX70 2615 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 BLOC1S5-TXNDC5H3BN57 136 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 HIST1H2ABP04908 130 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 IGFBP1P08833 259 aaPredicted RBP15.81■□□□□ 0.12
FXN-203ENST00000396366 USF1P22415 310 aaPredicted RBP15.81■□□□□ 0.12
FXN-203ENST00000396366 NR4A1P22736 598 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 PDLIM4P50479 330 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 UGT2B15P54855 530 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 TAS2R41P59536 307 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 RAB1AP62820 205 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 VLDLRP98155 873 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 RUNX1T1Q06455 604 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 SNTB2Q13425 540 aaKnown RBP15.81■□□□□ 0.12
FXN-203ENST00000396366 HIST3H2AQ7L7L0 130 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 HIPK1Q86Z02 1210 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 CDK20Q8IZL9 346 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 POU5F2Q8N7G0 328 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 HIST1H2ACQ93077 130 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 SLC19A3Q9BZV2 496 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 C20orf141Q9NUB4 165 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 RIMS3Q9UJD0 308 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 FKBP7Q9Y680 259 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 SVEP1Q4LDE5 3571 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 MXRA5Q9NR99 2828 aa15.81■□□□□ 0.12
FXN-203ENST00000396366 BBIP1A8MTZ0 92 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 NPPAP01160 153 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 F13BP05160 661 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 CSF3P09919 207 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 IGHV4-31P0DP07 118 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 ZNF35P13682 527 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 FUT1P19526 365 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 FUT4P22083 530 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 NR4A2P43354 598 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 LSM11P83369 360 aaKnown RBP eCLIP15.8■□□□□ 0.12
FXN-203ENST00000396366 GGTLC2Q14390 218 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 RAB39AQ14964 217 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 CYBRD1Q53TN4 286 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 NANOGNBQ7Z5D8 188 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 ZNF584Q8IVC4 421 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 ZNF566Q969W8 418 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 RCN3Q96D15 328 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 SLC25A44Q96H78 314 aaPredicted RBP15.8■□□□□ 0.12
FXN-203ENST00000396366 SH3GL3Q99963 347 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 BAG5Q9UL15 447 aa15.8■□□□□ 0.12
FXN-203ENST00000396366 RTTNQ86VV8 2226 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 MT-ND1P03886 318 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 QDPRP09417 244 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 PGA4P0DJD7 388 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 PGA3P0DJD8 388 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 ZNF16P17020 682 aaPredicted RBP15.79■□□□□ 0.12
FXN-203ENST00000396366 KDELR2P33947 212 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 AQP2P41181 271 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 PPOXP50336 477 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 MYBPC1Q00872 1141 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 RPL18Q07020 188 aaKnown RBP15.79■□□□□ 0.12
FXN-203ENST00000396366 MAPRE2Q15555 327 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 LRRC23Q53EV4 343 aaPredicted RBP15.79■□□□□ 0.12
FXN-203ENST00000396366 CYB5R2Q6BCY4 276 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 ERICH5Q6P6B1 374 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 SLC22A24Q8N4F4 322 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 IL17RDQ8NFM7 739 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 TPD52L3Q96J77 140 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 ZNF347Q96SE7 839 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 PIMREGQ9BSJ6 248 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 MRPL37Q9BZE1 423 aaKnown RBP15.79■□□□□ 0.12
FXN-203ENST00000396366 GID8Q9NWU2 228 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 CMTM6Q9NX76 183 aa15.79■□□□□ 0.12
FXN-203ENST00000396366 MALRD1Q5VYJ5 2156 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 IGHV4-61A0A0C4DH41 118 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 FAM220BPB1ANY3 271 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 PIP5K1CO60331 668 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 OR7A10O76100 309 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 OR5F1O95221 314 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 BCL10O95999 233 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 ADRA2AP08913 450 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 PIWIL3Q7Z3Z3 882 aaKnown RBP15.78■□□□□ 0.12
FXN-203ENST00000396366 LRP11Q86VZ4 500 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 PCYOX1LQ8NBM8 494 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 OR2T12Q8NG77 320 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 MOSPD2Q8NHP6 518 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 TMEM239Q8WW34 195 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 SGTBQ96EQ0 304 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 KCNK17Q96T54 332 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 RAB1BQ9H0U4 201 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 TMEM38BQ9NVV0 291 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 FZR1Q9UM11 496 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 CAPN7Q9Y6W3 813 aa15.78■□□□□ 0.12
FXN-203ENST00000396366 LOC390937A0A1W2PQ73 354 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms