RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PCGF3Q3KNV8 242 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 ZNF542PQ5EBM4 170 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 SFRP5Q5T4F7 317 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 BIVMQ86UB2 503 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 C19orf47Q8N9M1 422 aaKnown RBP14.26□□□□□ -0.13
HOXA3-202ENST00000396352 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.26□□□□□ -0.13
HOXA3-202ENST00000396352 OR4D10Q8NGI6 311 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 OR4C16Q8NGL9 310 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 TMEM106AQ96A25 262 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 KLHDC3Q9BQ90 382 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 WDR76Q9H967 626 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 STEAP1Q9UHE8 339 aa14.26□□□□□ -0.13
HOXA3-202ENST00000396352 KIR2DS5A0A0G2JLQ3 304 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 A0A0G2JNG1 304 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 KIR2DS3K7RE56 304 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 EFNB2P52799 333 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 SCAND1P57086 179 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 RPL18Q07020 188 aaKnown RBP14.25□□□□□ -0.13
HOXA3-202ENST00000396352 KIR2DS5Q14953 304 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 MCATQ8IVS2 390 aaKnown RBP14.25□□□□□ -0.13
HOXA3-202ENST00000396352 OR5M1Q8NGP8 315 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 C1QTNF6Q9BXI9 259 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 LAMP5Q9UJQ1 280 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 KCNMB2Q9Y691 235 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 TNFP01375 233 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 ALOX5APP20292 161 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 RBMS2Q15434 407 aaKnown RBP14.25□□□□□ -0.13
HOXA3-202ENST00000396352 ZNF227Q86WZ6 799 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 GALNT11Q8NCW6 608 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 PNPLA2Q96AD5 504 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 ULBP3Q9BZM4 244 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 OPN4Q9UHM6 478 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 IKZF2Q9UKS7 526 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 MFSD2BA6NFX1 497 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 H3BSH0 61 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 GPANK1O95872 356 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 HIST1H2ABP04908 130 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 AKT2P31751 481 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 MED25Q71SY5 747 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 HIST3H2AQ7L7L0 130 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 OR8K3Q8NH51 312 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 ZNF417Q8TAU3 575 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 HIST1H2ACQ93077 130 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 MCHR2Q969V1 340 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 KTI12Q96EK9 354 aaPredicted RBP14.25□□□□□ -0.13
HOXA3-202ENST00000396352 GRHPRQ9UBQ7 328 aa14.25□□□□□ -0.13
HOXA3-202ENST00000396352 MRPS33Q9Y291 106 aaKnown RBP14.25□□□□□ -0.13
HOXA3-202ENST00000396352 CACNA1IQ9P0X4 2223 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 GGT3PA6NGU5 568 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 CTAG2O75638 210 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 UBL4AP11441 157 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 CFPP27918 469 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 ADH7P40394 386 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 KIR3DL2P43630 455 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 SEC61A1P61619 476 aaKnown RBP14.24□□□□□ -0.13
HOXA3-202ENST00000396352 HLXQ14774 488 aaPredicted RBP14.24□□□□□ -0.13
HOXA3-202ENST00000396352 GRM7Q14831 915 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 ANKRD16Q6P6B7 361 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 DPY19L4Q7Z388 723 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 OR6N2Q8NGY6 317 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 AMELYQ99218 206 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 GINS4Q9BRT9 223 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 TMEM212A6NML5 194 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 RBBP9O75884 186 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 CTHP32929 405 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 CCR4P51679 360 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 EGR3Q06889 387 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 ODF4Q2M2E3 257 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 TMEM92Q6UXU6 159 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 ZNF676Q8N7Q3 588 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 ZDHHC1Q8WTX9 485 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 CXorf58Q96LI9 332 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 SDHAF2Q9NX18 166 aa14.24□□□□□ -0.13
HOXA3-202ENST00000396352 ZNF432O94892 652 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 SIX6O95475 246 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 NMBP08949 121 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 PRKACBP22694 351 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 DLX5P56178 289 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 GUCA2AQ02747 115 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 HHEXQ03014 270 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 KCNAB1Q14722 419 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 EMC4Q5J8M3 183 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 RGS7BPQ6MZT1 257 aaPredicted RBP14.23□□□□□ -0.13
HOXA3-202ENST00000396352 PRSS42Q7Z5A4 293 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 BPHLQ86WA6 291 aaPredicted RBP14.23□□□□□ -0.13
HOXA3-202ENST00000396352 SDR16C5Q8N3Y7 309 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 GPR148Q8TDV2 347 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 ZNF578Q96N58 590 aaPredicted RBP14.23□□□□□ -0.13
HOXA3-202ENST00000396352 COMMD4Q9H0A8 199 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 ZP3P21754 424 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 FAUP35544 74 aaKnown RBP14.23□□□□□ -0.13
HOXA3-202ENST00000396352 TAGLNQ01995 201 aaKnown RBP14.23□□□□□ -0.13
HOXA3-202ENST00000396352 PXDC1Q5TGL8 231 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 EEF1A1P5Q5VTE0 462 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 LRRC69Q6ZNQ3 347 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 OR51D1Q8NGF3 324 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 KLHL15Q96M94 604 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 LINC00052Q96N35 136 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 KCNK15Q9H427 330 aa14.23□□□□□ -0.13
HOXA3-202ENST00000396352 VCANP13611 3396 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms