RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 FAM172BPA6NC97 362 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 VSTM2BA6NLU5 285 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 TMEM212A6NML5 194 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 FTCDNL1E5RQL4 147 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 ZNF254O75437 659 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 TIAF1O95411 115 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 RAF1P04049 648 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 ZNF385CQ66K41 422 aaPredicted RBP15.15■□□□□ 0.02
NUP50-202ENST00000396096 LIX1LQ8IVB5 337 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 UBALD2Q8IYN6 164 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 OR8K3Q8NH51 312 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 CEP76Q8TAP6 659 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 ASB17Q8WXJ9 295 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 DMRTB1Q96MA1 342 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 OR6C1Q96RD1 312 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 SLITRK2Q9H156 845 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 SLC25A18Q9H1K4 315 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 IKZF2Q9UKS7 526 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 ADAMTS9Q9P2N4 1935 aa15.15■□□□□ 0.02
NUP50-202ENST00000396096 A0A087WV48 116 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 IGLV1-36A0A0B4J1U3 117 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 CALCBP10092 127 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 DHPSP49366 369 aaPredicted RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 FOXL2P58012 376 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 CCL7P80098 99 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 DCDP81605 110 aaKnown RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 DGCR2P98153 550 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 INSM1Q01101 510 aaPredicted RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 C17orf67Q0P5P2 114 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 RASGEF1BQ0VAM2 473 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 NTRK2Q16620 822 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 STAC2Q6ZMT1 411 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 NOXA1Q86UR1 476 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 CMTM4Q8IZR5 234 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 SMIM4Q8WVI0 70 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 ORAI1Q96D31 301 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 FYTTD1Q96QD9 318 aaKnown RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 OR8B4Q96RC9 309 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 TRAF4Q9BUZ4 470 aaPredicted RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 RARRES3Q9UL19 164 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 IGHV5-10-1A0A0J9YXX1 117 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 CPED1A4D0V7 1026 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 ZNF354AO60765 605 aaPredicted RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 SCRG1O75711 98 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 OR6A2O95222 327 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 YES1P07947 543 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 MAGEB1P43366 347 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 RRAS2P62070 204 aaPredicted RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 ZP4Q12836 540 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 SF3B4Q15427 424 aaKnown RBP eCLIP15.14■□□□□ 0.014e-8■■■■■ 40.5
NUP50-202ENST00000396096 HES5Q5TA89 166 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 PWWP2BQ6NUJ5 590 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 LRRTM1Q86UE6 522 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 TOMM5Q8N4H5 51 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 THEM6Q8WUY1 208 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 NSMAFQ92636 917 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 THRSPQ92748 146 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 SLC25A38Q96DW6 304 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 SMAD5Q99717 465 aaKnown RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 WDR77Q9BQA1 342 aaPredicted RBP15.14■□□□□ 0.01
NUP50-202ENST00000396096 COMMD4Q9H0A8 199 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 DPAGT1Q9H3H5 408 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 PLEKHA1Q9HB21 404 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 TCF7L1Q9HCS4 588 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 SLCO1C1Q9NYB5 712 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 CLEC4AQ9UMR7 237 aa15.14■□□□□ 0.01
NUP50-202ENST00000396096 SLC22A23A1A5C7 686 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 TMEM200CA6NKL6 621 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 ETV2O00321 342 aaPredicted RBP15.13■□□□□ 0.01
NUP50-202ENST00000396096 SIGLEC6O43699 453 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 CD3GP09693 182 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 CCR9P51686 369 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 FBXW4P57775 412 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 DYRK1AQ13627 763 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 MFSD13AQ14CX5 517 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 PMS2CLQ68D20 193 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 C16orf47Q6ZP98 133 aaPredicted RBP15.13■□□□□ 0.01
NUP50-202ENST00000396096 SIAH3Q8IW03 269 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 PRSS35Q8N3Z0 413 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 ZNF417Q8TAU3 575 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 TTC9Q92623 222 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 C4orf45Q96LM5 186 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 ZNF587Q96SQ5 575 aaPredicted RBP15.13■□□□□ 0.01
NUP50-202ENST00000396096 AMELYQ99218 206 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 OR11A1Q9GZK7 315 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 ZNF275Q9NSD4 429 aaPredicted RBP15.13■□□□□ 0.01
NUP50-202ENST00000396096 COPZ2Q9P299 210 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 SUSD2Q9UGT4 822 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 KCNG2Q9UJ96 466 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 RBMX2Q9Y388 322 aaKnown RBP15.13■□□□□ 0.01
NUP50-202ENST00000396096 NUBP2Q9Y5Y2 271 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 TNRC18O15417 2968 aaPredicted RBP15.13■□□□□ 0.01
NUP50-202ENST00000396096 PRUNE2Q8WUY3 3088 aa15.13■□□□□ 0.01
NUP50-202ENST00000396096 NPIPB13A6NJU9 1138 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 NPIPB4C9JG80 1138 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 SOX1O00570 391 aaPredicted RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 GPANK1O95872 356 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 PLGP00747 810 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms