RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 WDFY3Q8IZQ1 3526 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 SEC16AO15027 2179 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 ZNF98A6NK75 572 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 SNRPGP15A8MWD9 76 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 EEF1E1-BLOC1S5C9J1V9 151 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 KCNJ13O60928 360 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 PLGP00747 810 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-203ENST00000395060 UBXN2BQ14CS0 331 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 Q499Y3 187 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 OLFML2AQ68BL7 652 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 FAM109BQ6ICB4 259 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-203ENST00000395060 RAB12Q6IQ22 244 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 HAGHLQ6PII5 290 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-203ENST00000395060 JAZF1Q86VZ6 243 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 PARGQ86W56 976 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 SYS1Q8N2H4 156 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 AMELYQ99218 206 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 FGF22Q9HCT0 170 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 MKKSQ9NPJ1 570 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-203ENST00000395060 PHPT1Q9NRX4 125 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-203ENST00000395060 ACTR10Q9NZ32 417 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 LRIT1Q9P2V4 623 aa13.03□□□□□ -0.32
CLIP2-203ENST00000395060 DCDC2BA2VCK2 349 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 LINC01553A4QN01 128 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 C17orf51A8MQB3 221 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 F5H0A9 414 aaPredicted RBP13.02□□□□□ -0.32
CLIP2-203ENST00000395060 LDOC1O95751 146 aaPredicted RBP13.02□□□□□ -0.32
CLIP2-203ENST00000395060 PPM1FP49593 454 aaPredicted RBP13.02□□□□□ -0.32
CLIP2-203ENST00000395060 SRSF3P84103 164 aaKnown RBP13.02□□□□□ -0.32
CLIP2-203ENST00000395060 DHODHQ02127 395 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 TMEM52BQ4KMG9 183 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 STEAP1BQ6NZ63 245 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 HSD17B13Q7Z5P4 300 aaPredicted RBP13.02□□□□□ -0.32
CLIP2-203ENST00000395060 METTL27Q8N6F8 245 aaPredicted RBP13.02□□□□□ -0.32
CLIP2-203ENST00000395060 PAQR8Q8TEZ7 354 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 GAL3ST3Q96A11 431 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 APMAPQ9HDC9 416 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 HAO2Q9NYQ3 351 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 EMC3Q9P0I2 261 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 STEAP1Q9UHE8 339 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 LAMP5Q9UJQ1 280 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 C19orf53Q9UNZ5 99 aaPredicted RBP13.02□□□□□ -0.32
CLIP2-203ENST00000395060 ZNF175Q9Y473 711 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 RTTNQ86VV8 2226 aa13.02□□□□□ -0.32
CLIP2-203ENST00000395060 KANTRA0A1W2PQU2 76 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 GGT3PA6NGU5 568 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 TUBAL3A6NHL2 446 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 C11orf98E9PRG8 122 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 SLC25A12O75746 678 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 AGR2O95994 175 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 CEACAM5P06731 702 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 ITGA5P08648 1049 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 OR4E1P0C645 316 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 CBR1P16152 277 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 MPGP29372 298 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 MNDAP41218 407 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 ACAA2P42765 397 aaKnown RBP13.02□□□□□ -0.33
CLIP2-203ENST00000395060 EPHA4P54764 986 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 TMEM240Q5SV17 173 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 ZNF227Q86WZ6 799 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 SLC35F3Q8IY50 421 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 CDRT4Q8N9R6 151 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 POMGNT2Q8NAT1 580 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 USB1Q9BQ65 265 aaKnown RBP13.02□□□□□ -0.33
CLIP2-203ENST00000395060 IGFLR1Q9H665 355 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 PRELID3BQ9Y3B1 194 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 ENTPD2Q9Y5L3 495 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 C13orf42A0A1B0GVH6 325 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 OR5H14A6NHG9 310 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 H7C417 338 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 FADS1O60427 444 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 BRINP1O60477 761 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 IL5P05113 134 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 RAB40ALP0C0E4 278 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 VAMP1P23763 118 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 PRSS3P35030 304 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 CAPZA1P52907 286 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 ATP1B3P54709 279 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 CTXN1P60606 82 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 FAM78AQ5JUQ0 283 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 FCRL6Q6DN72 434 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 ZCCHC12Q6PEW1 402 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 KRT77Q7Z794 578 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 C12orf45Q8N5I9 185 aaPredicted RBP13.02□□□□□ -0.33
CLIP2-203ENST00000395060 OR4C3Q8NH37 302 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 RAB40AQ8WXH6 277 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 MOGAT1Q96PD6 335 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 C14orf105Q9NVL8 296 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 MTFP1Q9UDX5 166 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 PCDHB10Q9UN67 800 aa13.02□□□□□ -0.33
CLIP2-203ENST00000395060 TMEM200CA6NKL6 621 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 CTAG2O75638 210 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 AVPR2P30518 371 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 SKP1P63208 163 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 ALKBH1Q13686 389 aaKnown RBP13.01□□□□□ -0.33
CLIP2-203ENST00000395060 NKAIN2Q5VXU1 208 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 UNQ9370/PRO34162Q6UXP9 181 aa13.01□□□□□ -0.33
CLIP2-203ENST00000395060 OR2W3Q7Z3T1 314 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms