RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 PCDHGB2Q9Y5G2 931 aa8.35□□□□□ -1.07
CDH11-202ENST00000394156 APEX1P27695 318 aaKnown RBP8.35□□□□□ -1.07
CDH11-202ENST00000394156 FGFBP1Q14512 234 aa8.35□□□□□ -1.07
CDH11-202ENST00000394156 RNASE10Q5GAN6 216 aaKnown RBP8.35□□□□□ -1.07
CDH11-202ENST00000394156 FTMTQ8N4E7 242 aa8.35□□□□□ -1.07
CDH11-202ENST00000394156 ZNF808Q8N4W9 903 aaPredicted RBP8.35□□□□□ -1.07
CDH11-202ENST00000394156 ZNF223Q9UK11 482 aaPredicted RBP8.35□□□□□ -1.07
CDH11-202ENST00000394156 HIF3AQ9Y2N7 669 aa8.35□□□□□ -1.07
CDH11-202ENST00000394156 PTHLHP12272 177 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 CAV2P51636 162 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 ACVR1Q04771 509 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 OR8B8Q15620 311 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 PHLDA2Q53GA4 152 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 B3GNTL1Q67FW5 361 aaPredicted RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 OR6V1Q8N148 313 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 TMEM106AQ96A25 262 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 OCIAD1Q9NX40 245 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 A0A1B0GTH9 108 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 QDPRP09417 244 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 PRSS3P35030 304 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 THBS2P35442 1172 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 PPIAP62937 165 aaKnown RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 FZD2Q14332 565 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 SPRED1Q7Z699 444 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 UBQLN3Q9H347 655 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 RALYQ9UKM9 306 aaKnown RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 CNOT11Q9UKZ1 510 aaKnown RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 BOKQ9UMX3 212 aaPredicted RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 AGAP5A6NIR3 686 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 METTL15A6NJ78 407 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 CX3CR1P49238 355 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 GLYATL3Q5SZD4 288 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 OR10K2Q6IF99 312 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 PLXDC2Q6UX71 529 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 OR10G3Q8NGC4 313 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 SGPP1Q9BX95 441 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 LRFN1Q9P244 771 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 TCRBV5S2A0A599 114 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 GALR3O60755 368 aaPredicted RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 SMIM18P0DKX4 95 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 RAC2P15153 192 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 HTRA4P83105 476 aaPredicted RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 SPINK14Q6IE38 97 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 DEFB108BQ8NET1 73 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 OR52N5Q8NH56 324 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 LMF2Q9BU23 707 aaKnown RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 SIRT5Q9NXA8 310 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 ZNF281Q9Y2X9 895 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 ZNF175Q9Y473 711 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 FITM1A5D6W6 292 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 CREBL2O60519 120 aaPredicted RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 SLC22A5O76082 557 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 ANXA7P20073 488 aaKnown RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 RAB40BQ12829 278 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 C1orf140Q5VVS0 124 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 PTOV1Q86YD1 416 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 ADGRF3Q8IZF5 1079 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 OR1L3Q8NH93 324 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 GOT1L1Q8NHS2 421 aaPredicted RBP8.34□□□□□ -1.07
CDH11-202ENST00000394156 DEDD2Q8WXF8 326 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 ISL2Q96A47 359 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 C1orf198Q9H425 327 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 KCNK15Q9H427 330 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 WASH6PQ9NQA3 447 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 SLC22A13Q9Y226 551 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 SLC22A7Q9Y694 548 aa8.34□□□□□ -1.07
CDH11-202ENST00000394156 SBF1O95248 1867 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 C5orf49A4QMS7 147 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 ZNF736B4DX44 427 aaPredicted RBP8.33□□□□□ -1.08
CDH11-202ENST00000394156 ANXA3P12429 323 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 RPS19P39019 145 aaKnown RBP8.33□□□□□ -1.08
CDH11-202ENST00000394156 KIAA1024LP59773 190 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 GABREP78334 506 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 TRAM1Q15629 374 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 KDM4DQ6B0I6 523 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 CPEB2Q7Z5Q1 589 aaKnown RBP8.33□□□□□ -1.08
CDH11-202ENST00000394156 ZNF695Q8IW36 515 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 C10orf111Q8N326 155 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 OR51E1Q8TCB6 317 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 RANBP3Q9H6Z4 567 aaPredicted RBP8.33□□□□□ -1.08
CDH11-202ENST00000394156 PTTG3PQ9NZH4 202 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 IGHV1OR15-9A0A0B4J2B8 117 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 PLSCR5A0PG75 271 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 H3BMH7 237 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 MPZL1O95297 269 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 GNB3P16520 340 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 MRPL19P49406 292 aaKnown RBP8.33□□□□□ -1.08
CDH11-202ENST00000394156 RBM12BQ8IXT5 1001 aaKnown RBP8.33□□□□□ -1.08
CDH11-202ENST00000394156 SCGB1C1Q8TD33 95 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 KTI12Q96EK9 354 aaPredicted RBP8.33□□□□□ -1.08
CDH11-202ENST00000394156 SLC46A1Q96NT5 459 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 DOCK9Q9BZ29 2069 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 FUOMA2VDF0 154 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 TARM1B6A8C7 271 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 KLK10O43240 276 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 IGHV3-13P01766 116 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 IGHV3-7P01780 117 aa8.33□□□□□ -1.08
CDH11-202ENST00000394156 CTSBP07858 339 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms