RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SLC2A5P22732 501 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 PPP1R8Q12972 351 aaKnown RBP11.71□□□□□ -0.53
USP44-202ENST00000393091 C1DQ13901 141 aaKnown RBP11.71□□□□□ -0.53
USP44-202ENST00000393091 P2RY8Q86VZ1 359 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 OR51A7Q8NH64 312 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 EME1Q96AY2 570 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 APH1AQ96BI3 265 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 TXNDC15Q96J42 360 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 ZNF570Q96NI8 536 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 PRRG3Q9BZD7 231 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 OBP2BQ9NPH6 170 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 TBC1D23Q9NUY8 699 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 GRHPRQ9UBQ7 328 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 UGT2A1Q9Y4X1 527 aa11.71□□□□□ -0.53
USP44-202ENST00000393091 TPRP12270 2363 aaKnown RBP11.71□□□□□ -0.54
USP44-202ENST00000393091 SLC22A23A1A5C7 686 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 SLC35F4A4IF30 521 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 SAC3D1A6NKF1 404 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 MRPL33O75394 65 aaKnown RBP11.71□□□□□ -0.54
USP44-202ENST00000393091 GABRB1P18505 474 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 PEX2P28328 305 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 GGT2P36268 569 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 ERFP50548 548 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 CLDN17P56750 224 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 SLC36A3Q495N2 470 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 ZNF566Q969W8 418 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 B3GAT2Q9NPZ5 323 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 GLTPQ9NZD2 209 aa11.71□□□□□ -0.54
USP44-202ENST00000393091 HRGP04196 525 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 HSPA13P48723 471 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 PCK2Q16822 640 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 SLC35D3Q5M8T2 416 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 ANKRD34AQ69YU3 496 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 VWA1Q6PCB0 445 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 MUS81Q96NY9 551 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 CRNNQ9UBG3 495 aaPredicted RBP11.7□□□□□ -0.54
USP44-202ENST00000393091 GPR52Q9Y2T5 361 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 FKBP7Q9Y680 259 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 CACNA1BQ00975 2339 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 M0R3G1 203 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 MPGP29372 298 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 BIDP55957 195 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 KRR1Q13601 381 aaKnown RBP11.7□□□□□ -0.54
USP44-202ENST00000393091 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 LINGO2Q7L985 606 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 ZGRF1Q86YA3 2104 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 EGFL6Q8IUX8 553 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 FAM26EQ8N5C1 309 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 ICA1LQ8NDH6 482 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 TSSK6Q9BXA6 273 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 GPR35Q9HC97 309 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 FAM118AQ9NWS6 357 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 KCNG2Q9UJ96 466 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 MOKQ9UQ07 419 aa11.7□□□□□ -0.54
USP44-202ENST00000393091 IGLV1-36A0A0B4J1U3 117 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 H0YHG0 523 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 CLDN14O95500 239 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 SELENOPP49908 381 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 ITGADQ13349 1161 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 TRIP10Q15642 601 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 OCLNQ16625 522 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 TEX30Q5JUR7 227 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 ZNF474Q6S9Z5 364 aaPredicted RBP11.69□□□□□ -0.54
USP44-202ENST00000393091 RNASE6Q93091 150 aaKnown RBP11.69□□□□□ -0.54
USP44-202ENST00000393091 HAO2Q9NYQ3 351 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 ORC6Q9Y5N6 252 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 IER3IP1Q9Y5U9 82 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 TEX13CA0A0J9YWL9 993 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 MPZL2O60487 215 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 BAG2O95816 211 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 F13BP05160 661 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 ACVR1BP36896 505 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.69□□□□□ -0.54
USP44-202ENST00000393091 LPCAT4Q643R3 524 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 ACSM5Q6NUN0 579 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 LRFN4Q6PJG9 635 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 ZNF433Q8N7K0 673 aaPredicted RBP11.69□□□□□ -0.54
USP44-202ENST00000393091 TEX12Q9BXU0 123 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 PRODHO43272 600 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 MITFO75030 526 aaPredicted RBP11.69□□□□□ -0.54
USP44-202ENST00000393091 PPP1R3DO95685 299 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 CRABP1P29762 137 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 CDKN2AP42771 156 aaKnown RBP11.69□□□□□ -0.54
USP44-202ENST00000393091 BLVRAP53004 296 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 ERVK-25P63136 954 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 HIST1H3AP68431 136 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 PHYHD1Q5SRE7 291 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 HIST2H3PS2Q5TEC6 136 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 HIST2H3AQ71DI3 136 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 SLC37A3Q8NCC5 494 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 TFAP2CQ92754 450 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 VCXQ9H320 206 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 TOR3AQ9H497 397 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 COQ3Q9NZJ6 369 aa11.69□□□□□ -0.54
USP44-202ENST00000393091 ZNF726A6NNF4 738 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 PLGP00747 810 aaPredicted RBP11.68□□□□□ -0.54
USP44-202ENST00000393091 IFNGP01579 166 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 ITGA5P08648 1049 aa11.68□□□□□ -0.54
USP44-202ENST00000393091 HIST1H1CP16403 213 aaKnown RBP11.68□□□□□ -0.54
USP44-202ENST00000393091 NPR2P20594 1047 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms