RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TCRBP04435 133 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 SAGP10523 405 aaPredicted RBP17.29■□□□□ 0.36
CCDC50-202ENST00000392456 PPP3CBP16298 524 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 S100A11P31949 105 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 CTBP2P56545 445 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 RPL13AP3Q6NVV1 102 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 TCTEX1D2Q8WW35 142 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 HSD17B8Q92506 261 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 MISP3Q96FF7 219 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 PLEKHA6Q9Y2H5 1048 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 A0A087WV62 115 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 A8MVJ9 347 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 CDX4O14627 284 aaPredicted RBP17.29■□□□□ 0.36
CCDC50-202ENST00000392456 LANCL1O43813 399 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 PRKNO60260 465 aaPredicted RBP17.29■□□□□ 0.36
CCDC50-202ENST00000392456 SUSD5O60279 629 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 ANXA7P20073 488 aaKnown RBP17.29■□□□□ 0.36
CCDC50-202ENST00000392456 GNG10P50151 68 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 MINDY4Q4G0A6 757 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 PLAG1Q6DJT9 500 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 SHISA6Q6ZSJ9 500 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 ASB18Q6ZVZ8 466 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 SLC30A8Q8IWU4 369 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 DTD1Q8TEA8 209 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 RHBDD1Q8TEB9 315 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 LRR1Q96L50 414 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 PTCHD1Q96NR3 888 aa17.29■□□□□ 0.36
CCDC50-202ENST00000392456 A0A1B0GX78 115 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 C1orf196B1AJZ1 125 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 NTN3O00634 580 aaPredicted RBP17.28■□□□□ 0.36
CCDC50-202ENST00000392456 OIP5O43482 229 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 MED6O75586 246 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 TMEM11P17152 192 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 OR52J3Q8NH60 311 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 OR6X1Q8NH79 312 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 FBXO17Q96EF6 278 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 LOXL4Q96JB6 756 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 EPYCQ99645 322 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 MESP1Q9BRJ9 268 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 TMPRSS13Q9BYE2 586 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 SLC25A32Q9H2D1 315 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 BARX1Q9HBU1 254 aaPredicted RBP17.28■□□□□ 0.36
CCDC50-202ENST00000392456 RHCGQ9UBD6 479 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 FREM2Q5SZK8 3169 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 CENPVL1A0A0U1RR11 272 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 BTBD17A6NE02 478 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 ZNF879B4DU55 563 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 DPM1O60762 260 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 RPS2P15880 293 aaKnown RBP17.28■□□□□ 0.36
CCDC50-202ENST00000392456 RAB2AP61019 212 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 SKP2Q13309 424 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 TMEM255AQ5JRV8 349 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 EXOSC6Q5RKV6 272 aaKnown RBP17.28■□□□□ 0.36
CCDC50-202ENST00000392456 C22orf42Q6IC83 251 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 HEPHL1Q6MZM0 1159 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 OR10J5Q8NHC4 309 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 MVB12AQ96EY5 273 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 OPN3Q9H1Y3 402 aaPredicted RBP17.28■□□□□ 0.36
CCDC50-202ENST00000392456 BCL2L10Q9HD36 194 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 SIDT1Q9NXL6 827 aaKnown RBP17.28■□□□□ 0.36
CCDC50-202ENST00000392456 FTSJ1Q9UET6 329 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 LHX6Q9UPM6 363 aa17.28■□□□□ 0.36
CCDC50-202ENST00000392456 A0A1W2PPE3 182 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 GXYLT2A0PJZ3 443 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 RFPL4AA6NLU0 287 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 RFPL4AL1F8VTS6 287 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 FFAR1O14842 300 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 CSO75390 466 aaKnown RBP17.27■□□□□ 0.36
CCDC50-202ENST00000392456 ZNF44P15621 663 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 MAP3K8P41279 467 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 GRK6P43250 576 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 IDH2P48735 452 aaKnown RBP17.27■□□□□ 0.36
CCDC50-202ENST00000392456 EMDP50402 254 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 POU4F2Q12837 409 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 ZNF660Q6AZW8 331 aaPredicted RBP17.27■□□□□ 0.36
CCDC50-202ENST00000392456 ZNF321PQ8N8H1 164 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 MARS2Q96GW9 593 aaKnown RBP17.27■□□□□ 0.36
CCDC50-202ENST00000392456 DGAT2Q96PD7 388 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 ZNF607Q96SK3 696 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 SLC9A8Q9Y2E8 581 aa17.27■□□□□ 0.36
CCDC50-202ENST00000392456 IGHV2-5P01817 119 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 RAC2P15153 192 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 ARHGAP40Q5TG30 622 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 NPSR1Q6W5P4 371 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 COX15Q7KZN9 410 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 FAM122BQ7Z309 247 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 VRK2Q86Y07 508 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF383Q8NA42 475 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 OR4N2Q8NGD1 307 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 OR9Q1Q8NGQ5 310 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 GEMIN6Q8WXD5 167 aaKnown RBP17.27■□□□□ 0.35
CCDC50-202ENST00000392456 SLAMF9Q96A28 289 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 AKIRIN1Q9H9L7 192 aaPredicted RBP17.27■□□□□ 0.35
CCDC50-202ENST00000392456 DMXL1Q9Y485 3027 aa17.27■□□□□ 0.35
CCDC50-202ENST00000392456 TMEM218A2RU14 115 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 M0R3H8 397 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 PPIHO43447 177 aaKnown RBP17.26■□□□□ 0.35
CCDC50-202ENST00000392456 PRAMEF2O60811 474 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 KRT33AO76009 404 aa17.26■□□□□ 0.35
CCDC50-202ENST00000392456 OR8U8P0C7N1 319 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms