RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TUBG2Q9NRH3 451 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 MRPL39Q9NYK5 338 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CNOT2Q9NZN8 540 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 UXTQ9UBK9 157 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CTSFQ9UBX1 484 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 MARCOQ9UEW3 520 aaPredicted RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 WARS2Q9UGM6 360 aaKnown RBP1.57□□□□□ -2.16
TRAV40-201ENST00000390467 GNPTGQ9UJJ9 305 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ANAPC7Q9UJX3 599 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 CFL2Q9Y281 166 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PPIL1Q9Y3C6 166 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 ADCY9O60503 1353 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 NCAPD2Q15021 1401 aa1.57□□□□□ -2.16
TRAV40-201ENST00000390467 PIKFYVEQ9Y2I7 2098 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 A0A0J9YYE9 177 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 GOLGA8IPA6NC78 632 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 BTBD17A6NE02 478 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 OR2AG2A6NM03 316 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 H3BQV1 296 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 GOLGA8MH3BSY2 632 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF701M0R085 212 aaPredicted RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 HIP1O00291 1037 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 NDUFAB1O14561 156 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 LSM1O15116 133 aaKnown RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 POLR1CO15160 346 aaPredicted RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 DUX1O43812 170 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SNNO75324 88 aaPredicted RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SPAG7O75391 227 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ATP5HO75947 161 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SNAI1O95863 264 aaPredicted RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 F10P00742 488 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 TRBC1P01850 177 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 HLA-DRAP01903 254 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 APOA1P02647 267 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 UGT2B4P06133 528 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 CAPN1P07384 714 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 RBMY1CP0DJD4 496 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ICAM2P13598 275 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 UQCRBP14927 111 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SRMP19623 302 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 HNF1AP20823 631 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 LCN1P31025 176 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 PPP1R2P41236 205 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SYKP43405 635 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 CBX5P45973 191 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 BIDP55957 195 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 TAS2R19P59542 299 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 YWHAEP62258 255 aaKnown RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 RPL23AP62750 156 aaKnown RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 TGFBR3Q03167 851 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 DMC1Q14565 340 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 MOGQ16653 247 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 HSDL1Q3SXM5 330 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF311Q5JNZ3 666 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SPANXN2Q5MJ10 180 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 LY6G6FQ5SQ64 297 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SAPCD1Q5SSQ6 148 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 LDLRAP1Q5SW96 308 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 CARD17Q5XLA6 110 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ACSM5Q6NUN0 579 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 PPP1R2P3Q6NXS1 205 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 BLOC1S2Q6QNY1 142 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SASS6Q6UVJ0 657 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 BZW1Q7L1Q6 419 aaKnown RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 COPS6Q7L5N1 327 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 BHLHA15Q7RTS1 189 aaPredicted RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 C6orf120Q7Z4R8 191 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ANKRD37Q7Z713 158 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 KIAA1328Q86T90 577 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 CDKL3Q8IVW4 592 aaPredicted RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 LRRC34Q8IZ02 419 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 CENPLQ8N0S6 344 aaPredicted RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 RNF148Q8N7C7 305 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 NECAB1Q8N987 351 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 FNDC5Q8NAU1 212 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 OR51S1Q8NGJ8 323 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ANGPTL6Q8NI99 470 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 UBALD1Q8TB05 177 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 UBA3Q8TBC4 463 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 CD300LFQ8TDQ1 290 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 NDRG1Q92597 394 aaKnown RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ARPC1AQ92747 370 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 TNFRSF14Q92956 283 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 PPP1R14BQ96C90 147 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 CHP1Q99653 195 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SH3GL3Q99963 347 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SPATA16Q9BXB7 569 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 BBS2Q9BXC9 721 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 SHCBP1LQ9BZQ2 653 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ATG10Q9H0Y0 220 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 DNTTIP1Q9H147 329 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 AUNIPQ9H7T9 357 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 LPAR2Q9HBW0 351 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 NEK6Q9HC98 313 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 MRPL47Q9HD33 250 aaKnown RBP1.56□□□□□ -2.16
TRAV40-201ENST00000390467 ZDHHC4Q9NPG8 344 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 EURLQ9NYK6 297 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 IL37Q9NZH6 218 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 STAP1Q9ULZ2 295 aa1.56□□□□□ -2.16
TRAV40-201ENST00000390467 MGAT4BQ9UQ53 548 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms