RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 C21orf59P57076 290 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 GPX6P59796 221 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 SMARCB1Q12824 385 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 DAZ2Q13117 558 aaKnown RBP3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 UNC119Q13432 240 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 PRPSAP1Q14558 356 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 C9orf135Q5VTT2 229 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 ZNF836Q6ZNA1 936 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 THOC6Q86W42 341 aaKnown RBP3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 ZADH2Q8N4Q0 377 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 GEMIN6Q8WXD5 167 aaKnown RBP3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 RDH5Q92781 318 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 MYDGFQ969H8 173 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 SGK3Q96BR1 496 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 OR2M2Q96R28 347 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 ATP5SQ99766 215 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 C20orf24Q9BUV8 137 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 DAZ3Q9NR90 486 aaKnown RBP3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 HEBP2Q9Y5Z4 205 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 NSD2O96028 1365 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 NINLQ9Y2I6 1382 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 ZNF318Q5VUA4 2279 aa3.73□□□□□ -1.81
RNU6-40P-201ENST00000384254 IGKV6D-41A0A0C4DH26 115 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 A0A0G2JLM5 398 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 A0A1B0GUA9 196 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 SMCO2A6NFE2 343 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 RAB29O14966 203 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 CDH16O75309 829 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 H6PDO95479 791 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 ANXA5P08758 320 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 DNAH10OSP0CZ25 163 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 ZNF43P17038 809 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 DRD3P35462 400 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 CTRLP40313 264 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 NAA10P41227 235 aaPredicted RBP3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 RORCP51449 518 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 SSR4P51571 173 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 ZNF92Q03936 586 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 C2orf83Q53S99 150 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 FRMPD2BQ6IN97 320 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 ACP7Q6ZNF0 438 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 SH2D6Q7Z4S9 175 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 MS4A15Q8N5U1 240 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 DTX3LQ8TDB6 740 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 BLOC1S5Q8TDH9 187 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 KIFAP3Q92845 792 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 NAP1L5Q96NT1 182 aaPredicted RBP3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 SH3GL3Q99963 347 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 TMEM185BQ9H7F4 350 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 SLC25A37Q9NYZ2 338 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 PCYOX1Q9UHG3 505 aa3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 LSM7Q9UK45 103 aaKnown RBP3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 TDRD6O60522 2096 aaKnown RBP3.72□□□□□ -1.81
RNU6-40P-201ENST00000384254 TRBV11-1A0A0K0K1C0 115 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 A6NDX4 124 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 KRTAP4-16G5E9R7 235 aaPredicted RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 KRT6AP02538 564 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 TDGF1P13385 188 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 GALP22466 123 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 AK4P27144 223 aaPredicted RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 OTX1P32242 354 aaPredicted RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 NSG1P42857 185 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 TMED10P49755 219 aaKnown RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 CCR8P51685 355 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 TDGF1P3P51864 188 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 RAB10P61026 200 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 RPS15P62841 145 aaKnown RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 AQP6Q13520 282 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 KRT71Q3SY84 523 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 ANKRD26P1Q6NSI1 321 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 SASS6Q6UVJ0 657 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 TMEM179Q6ZVK1 233 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 COX15Q7KZN9 410 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 BZW1Q7L1Q6 419 aaKnown RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 EIF3MQ7L2H7 374 aaKnown RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 ASCL5Q7RTU5 278 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 LUZP2Q86TE4 346 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 GTPBP8Q8N3Z3 284 aaPredicted RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 Q8N9W7 124 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 OR1S2Q8NGQ3 325 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 SLC7A13Q8TCU3 470 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 NXF3Q9H4D5 531 aaKnown RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 EXO5Q9H790 373 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 DEC1Q9P2X7 70 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 UXTQ9UBK9 157 aaPredicted RBP3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 TMED5Q9Y3A6 229 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 GOLT1BQ9Y3E0 138 aa3.71□□□□□ -1.82
RNU6-40P-201ENST00000384254 GTF3C1Q12789 2109 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 OR2AG2A6NM03 316 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ERVV-1B6SEH8 477 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 WRBO00258 174 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 PEX7O00628 323 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 CLIC3O95833 236 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 MOSP00540 346 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 NR2C1P13056 603 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ZNF17P17021 662 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 SERPINB5P36952 375 aa3.7□□□□□ -1.82
RNU6-40P-201ENST00000384254 ACTA2P62736 377 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms