RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 A4GALTQ9NPC4 353 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 SLC22A11Q9NSA0 550 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 RPS19P39019 145 aaKnown RBP12.91□□□□□ -0.34
SNPH-201ENST00000381867 HCCSP53701 268 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 ATPAF1Q5TC12 328 aaPredicted RBP12.91□□□□□ -0.34
SNPH-201ENST00000381867 MCATQ8IVS2 390 aaKnown RBP12.91□□□□□ -0.34
SNPH-201ENST00000381867 SKA3Q8IX90 412 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 OR13C9Q8NGT0 318 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 PSMF1Q92530 271 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 SLC39A9Q9NUM3 307 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 PCDHGA1Q9Y5H4 931 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 TRIM23P36406 574 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 PCBD1P61457 104 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 RBPJQ06330 500 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 CATR1Q13166 79 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 KIAA0141Q14154 515 aaPredicted RBP12.91□□□□□ -0.34
SNPH-201ENST00000381867 STK11Q15831 433 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 PXDC1Q5TGL8 231 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 H3F3CQ6NXT2 135 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 Q6ZSR9 355 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 FRMD1Q8N878 549 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 SLC25A46Q96AG3 418 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 C14orf79Q96F83 325 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 WDR76Q9H967 626 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 MRPS28Q9Y2Q9 187 aaKnown RBP12.91□□□□□ -0.34
SNPH-201ENST00000381867 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
SNPH-201ENST00000381867 TMEM200CA6NKL6 621 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 GIPP09681 153 aaPredicted RBP12.91□□□□□ -0.34
SNPH-201ENST00000381867 FOLR1P15328 257 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 LAP3P28838 519 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 DPTQ07507 201 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 MZT1Q08AG7 82 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 TMEM201Q5SNT2 666 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 AADACL3Q5VUY0 350 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 VN1R3Q9BXE9 311 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 ADAMTSL1Q8N6G6 1762 aa12.91□□□□□ -0.34
SNPH-201ENST00000381867 TMEM265A0A087WTH1 108 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 NUDT19A8MXV4 375 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 MAGEB4O15481 346 aaPredicted RBP12.9□□□□□ -0.34
SNPH-201ENST00000381867 NSA2O95478 260 aaKnown RBP12.9□□□□□ -0.34
SNPH-201ENST00000381867 CHRM4P08173 479 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 BAGE3Q86Y29 109 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 BAGE2Q86Y30 109 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 ZNF610Q8N9Z0 462 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 EXOSC3Q9NQT5 275 aaKnown RBP12.9□□□□□ -0.34
SNPH-201ENST00000381867 NPFFR2Q9Y5X5 522 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 COL4A1P02462 1669 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 SYT5O00445 386 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 PRDX1Q06830 199 aaKnown RBP12.9□□□□□ -0.34
SNPH-201ENST00000381867 PPP1R3BQ86XI6 285 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 L3MBTL4Q8NA19 623 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 MFSD9Q8NBP5 474 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 PIGCQ92535 297 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 ZNF75AQ96N20 296 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 TNFRSF13CQ96RJ3 184 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 IL21Q9HBE4 155 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 MCTS1Q9ULC4 181 aaKnown RBP12.9□□□□□ -0.34
SNPH-201ENST00000381867 EVPLQ92817 2033 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 ZNF728P0DKX0 622 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 FPR3P25089 353 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 IL2RGP31785 369 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 FOXK2Q01167 660 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 Q6ZTK2 550 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 KLHDC8BQ8IXV7 354 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 LFNGQ8NES3 379 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 OR10Z1Q8NGY1 313 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 OR1E3Q8WZA6 343 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 USB1Q9BQ65 265 aaKnown RBP12.9□□□□□ -0.34
SNPH-201ENST00000381867 FBXO8Q9NRD0 319 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 M0QYG6 137 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 FURINP09958 794 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 FCGR2AP12318 317 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 HLA-DOBP13765 273 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 GDF1P27539 372 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 PSMB5P28074 263 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 IAH1Q2TAA2 248 aaPredicted RBP12.9□□□□□ -0.34
SNPH-201ENST00000381867 ZMAT1Q5H9K5 638 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 ST8SIA4Q92187 359 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 C10orf90Q96M02 699 aa12.9□□□□□ -0.34
SNPH-201ENST00000381867 FYTTD1Q96QD9 318 aaKnown RBP12.9□□□□□ -0.34
SNPH-201ENST00000381867 LOC100289279A0A1B0GTE1 492 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 HLA-HP01893 362 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 ADRB1P08588 477 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 PIPP12273 146 aaPredicted RBP12.9□□□□□ -0.35
SNPH-201ENST00000381867 ECI1P42126 302 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 ALKBH1Q13686 389 aaKnown RBP12.9□□□□□ -0.35
SNPH-201ENST00000381867 FUNDC1Q8IVP5 155 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 NANOGP1Q8N7R0 232 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 DDOQ99489 341 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 PCED1AQ9H1Q7 454 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 C1orf198Q9H425 327 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 CLEC2DQ9UHP7 191 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 FBXL4Q9UKA2 621 aa12.9□□□□□ -0.35
SNPH-201ENST00000381867 CD53P19397 219 aa12.89□□□□□ -0.35
SNPH-201ENST00000381867 DCAF7P61962 342 aa12.89□□□□□ -0.35
SNPH-201ENST00000381867 EEF1A1P68104 462 aaKnown RBP12.89□□□□□ -0.35
SNPH-201ENST00000381867 PDZK1IP1Q13113 114 aa12.89□□□□□ -0.35
SNPH-201ENST00000381867 SHEQ5VZ18 495 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms