RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 IGHG1P01857 330 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 ALPLP05186 524 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 PGA3P0DJD8 388 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 SDHAP31040 664 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 GIPRP48546 466 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 RPS6KA3P51812 740 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 RAP1BP61224 184 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 RAP1AP62834 184 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 FAM27E3Q08E93 113 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 FAPQ12884 760 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 DAG1Q14118 895 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 P2RY6Q15077 328 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 HIST3H3Q16695 136 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 FAM205BPQ63HN1 556 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 LRFN4Q6PJG9 635 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 ZBTB49Q6ZSB9 765 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 LINGO2Q7L985 606 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 HDDC2Q7Z4H3 204 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 LNX2Q8N448 690 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 OR52L1Q8NGH7 329 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 OR4Q3Q8NH05 313 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 MAGEE2Q8TD90 523 aaPredicted RBP13.64□□□□□ -0.23
PDGFB-202ENST00000381551 HDAC2Q92769 488 aaKnown RBP13.64□□□□□ -0.23
PDGFB-202ENST00000381551 RNASE6Q93091 150 aaKnown RBP13.64□□□□□ -0.23
PDGFB-202ENST00000381551 EME1Q96AY2 570 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 KCNK17Q96T54 332 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 KRT84Q9NSB2 600 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 ASB6Q9NWX5 421 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 GALNT8Q9NY28 637 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 USE1Q9NZ43 259 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 GLTPQ9NZD2 209 aa13.64□□□□□ -0.23
PDGFB-202ENST00000381551 NKX1-2Q9UD57 310 aaPredicted RBP13.64□□□□□ -0.23
PDGFB-202ENST00000381551 TEX13CA0A0J9YWL9 993 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 RPL36A-HNRNPH2H7BZ11 118 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 M0R3G1 203 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 SOCS2O14508 198 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 ARHGEF9O43307 516 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 KRT33AO76009 404 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 IGHV1-2P23083 117 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 POU1F1P28069 291 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 CD79BP40259 229 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 CSNK1A1P48729 337 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 ALDH3A2P51648 485 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 CRISP1P54107 249 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 FOXG1P55316 489 aaPredicted RBP13.63□□□□□ -0.23
PDGFB-202ENST00000381551 RIPK1Q13546 671 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 GINS1Q14691 196 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 MESTQ5EB52 335 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 ZNF362Q5T0B9 420 aaPredicted RBP13.63□□□□□ -0.23
PDGFB-202ENST00000381551 GPR137CQ8N3F9 429 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 SYT14Q8NB59 555 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 OR2T33Q8NG76 320 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 OR6N1Q8NGY5 312 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 TEX47Q8TBZ9 253 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 RASD2Q96D21 266 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 NMD3Q96D46 503 aaKnown RBP13.63□□□□□ -0.23
PDGFB-202ENST00000381551 ZNF570Q96NI8 536 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 TBC1D23Q9NUY8 699 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 BAIAP2Q9UQB8 552 aa13.63□□□□□ -0.23
PDGFB-202ENST00000381551 RRP15Q9Y3B9 282 aaKnown RBP13.63□□□□□ -0.23
PDGFB-202ENST00000381551 KLF2Q9Y5W3 355 aaPredicted RBP13.63□□□□□ -0.23
PDGFB-202ENST00000381551 MAST4O15021 2626 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 EI24O14681 340 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 CASQ2O14958 399 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-202ENST00000381551 AHCYL1O43865 530 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 QDPRP09417 244 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 COX5AP20674 150 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 IGFBP5P24593 272 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 CDKN2AP42771 156 aaKnown RBP13.62□□□□□ -0.23
PDGFB-202ENST00000381551 CLRN1P58418 232 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 ESRRGP62508 458 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 CDK5Q00535 292 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 MYBPC1Q00872 1141 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 SLC34A1Q06495 639 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 ITGADQ13349 1161 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 PTGES3Q15185 160 aaKnown RBP13.62□□□□□ -0.23
PDGFB-202ENST00000381551 TRIP10Q15642 601 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 SFRP5Q5T4F7 317 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 LPCAT4Q643R3 524 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 ACSM5Q6NUN0 579 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 SLC27A4Q6P1M0 643 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 STAC2Q6ZMT1 411 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 CXorf67Q86X51 503 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-202ENST00000381551 MCHR2Q969V1 340 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 ZNF837Q96EG3 531 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-202ENST00000381551 LRRC46Q96FV0 321 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 ALKBH3Q96Q83 286 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-202ENST00000381551 RBP7Q96R05 134 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 DDOQ99489 341 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 ALG12Q9BV10 488 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 HDHD5Q9BXW7 423 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 RNPEPL1Q9HAU8 725 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 CRLF2Q9HC73 371 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 GPR35Q9HC97 309 aa13.62□□□□□ -0.23
PDGFB-202ENST00000381551 NPDC1Q9NQX5 325 aaPredicted RBP13.62□□□□□ -0.23
PDGFB-202ENST00000381551 LRRK2Q5S007 2527 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 HCFC1P51610 2035 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 SLC22A23A1A5C7 686 aa13.61□□□□□ -0.23
PDGFB-202ENST00000381551 PRSS37A4D1T9 235 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms