RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 NOX4Q9NPH5 578 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 A0A1W2PR80 420 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 GLRA1P23415 457 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 TAS2R46P59540 309 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 CYP1B1Q16678 543 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 MEP1BQ16820 701 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 PAGE3Q5JUK9 113 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 NANPQ8TBE9 248 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 VPS25Q9BRG1 176 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 IER2Q9BTL4 223 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 NXF2Q9GZY0 626 aaKnown RBP11.5□□□□□ -0.57
CHD3-203ENST00000380358 FBXO4Q9UKT5 387 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 TIMM9Q9Y5J7 89 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 HRH3Q9Y5N1 445 aa11.5□□□□□ -0.57
CHD3-203ENST00000380358 NQO2P16083 231 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 TLE4Q04727 773 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 EIF4HQ15056 248 aaKnown RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 FAM78AQ5JUQ0 283 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 CORO6Q6QEF8 472 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 BTLAQ7Z6A9 289 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 PRR7Q8TB68 274 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 SIGLEC10Q96LC7 697 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 ZCWPW2A0A1B0GU75 182 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 SLC22A23A1A5C7 686 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 RFPL3O75679 317 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 SULT1C4O75897 302 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 SELPLGQ14242 412 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 TATDN3Q17R31 274 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 PRTGQ2VWP7 1150 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 ASTLQ6HA08 431 aaPredicted RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 SLC38A5Q8WUX1 472 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 MRPS24Q96EL2 167 aaKnown RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 ZNF582Q96NG8 517 aaPredicted RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 NIPAL2Q9H841 368 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 NT5DC2Q9H857 520 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 MED9Q9NWA0 146 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 TAS2R5Q9NYW4 299 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 E9PCH4 1651 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 A0A0D9SG52 128 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 PCSK6P29122 969 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 PSMB3P49720 205 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 ZXDAP98168 799 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 TAGLNQ01995 201 aaKnown RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 FUT2Q10981 343 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 MEF2DQ14814 521 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 UBE2NLQ5JXB2 153 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 ACOT7LQ6ZUV0 252 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 MED25Q71SY5 747 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 BCDIN3DQ7Z5W3 292 aaKnown RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 ANKRD13BQ86YJ7 626 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 OR52H1Q8NGJ2 320 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 IL26Q9NPH9 171 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 TNFSF11O14788 317 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 MMP2P08253 660 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 WDR5P61964 334 aaKnown RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 MEPCEQ7L2J0 689 aaKnown RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 ARPC5LQ9BPX5 153 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 SLC2A11Q9BYW1 496 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 CGGBP1Q9UFW8 167 aaPredicted RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 TRAPPC4Q9Y296 219 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 SEMA3BQ13214 749 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 HAGHQ16775 308 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 Q56UQ5 140 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 RASD2Q96D21 266 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 STACQ99469 402 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 ST6GALNAC4Q9H4F1 302 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 POPDC3Q9HBV1 291 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 TMED7-TICAM2A0A0A6YYA0 188 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 IL2RAP01589 272 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 KIR2DS3Q14952 304 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 BLOC1S3Q6QNY0 202 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 UBALD1Q8TB05 177 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 NDFIP1Q9BT67 221 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 VRTNQ9H8Y1 702 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 LIN7CQ9NUP9 197 aaKnown RBP11.49□□□□□ -0.57
CHD3-203ENST00000380358 TMED7Q9Y3B3 224 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 MYH15Q9Y2K3 1946 aa11.49□□□□□ -0.57
CHD3-203ENST00000380358 SULT1A3P0DMM9 295 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 SULT1A4P0DMN0 295 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 TAS2R19P59542 299 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 GPR119Q8TDV5 335 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 ACY3Q96HD9 319 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 SPACA5Q96QH8 159 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 TNFRSF13CQ96RJ3 184 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 SRRQ9GZT4 340 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 RABL2AQ9UBK7 228 aaPredicted RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 SCML1Q9UN30 329 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 MMACHCQ9Y4U1 282 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 A0A1W2PNR3 127 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 FAM157AC9JC47 383 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 OLFM2O95897 454 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 IGHV3-13P01766 116 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 IGHV3-7P01780 117 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 ACSM1Q08AH1 577 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 DHRS7BQ6IAN0 325 aaPredicted RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 INSM2Q96T92 566 aaPredicted RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 CYTIPO60759 359 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 TRAPPC2P0DI81 140 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 TRAPPC2BP0DI82 140 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms