RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 FAM71F1Q96KD3 344 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-202ENST00000379446 LMF1Q96S06 567 aa5.97□□□□□ -1.45
NEDD9-202ENST00000379446 PDCD10Q9BUL8 212 aa5.97□□□□□ -1.45
NEDD9-202ENST00000379446 MRPL39Q9NYK5 338 aaKnown RBP5.97□□□□□ -1.45
NEDD9-202ENST00000379446 TMED7-TICAM2A0A0A6YYA0 188 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 KLK8O60259 260 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 DBHP09172 617 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 CD22P20273 847 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 PTAFRP25105 342 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 BIDP55957 195 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 RPL11P62913 178 aaKnown RBP5.96□□□□□ -1.45
NEDD9-202ENST00000379446 PUDPQ08623 228 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 COX10Q12887 443 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 EDDM3AQ14507 147 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 MAD2L1BPQ15013 274 aaPredicted RBP5.96□□□□□ -1.45
NEDD9-202ENST00000379446 TRAM2Q15035 370 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 AGERQ15109 404 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 ADNP2Q6IQ32 1131 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 ADAM5Q6NVV9 412 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 ZNF613Q6PF04 617 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 NLRP8Q86W28 1048 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 NUP37Q8NFH4 326 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 SLC25A43Q8WUT9 341 aaPredicted RBP5.96□□□□□ -1.45
NEDD9-202ENST00000379446 DNAJA4Q8WW22 397 aaPredicted RBP5.96□□□□□ -1.45
NEDD9-202ENST00000379446 PSD2Q9BQI7 771 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 ZNF442Q9H7R0 627 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 GALNT9Q9HCQ5 603 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 MCUBQ9NWR8 336 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 VSX1Q9NZR4 365 aaPredicted RBP5.96□□□□□ -1.45
NEDD9-202ENST00000379446 ONECUT1Q9UBC0 465 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 MYOTQ9UBF9 498 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 TMED7Q9Y3B3 224 aa5.96□□□□□ -1.45
NEDD9-202ENST00000379446 ZNF407Q9C0G0 2248 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 CACNA1DQ01668 2161 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ADAMDEC1O15204 470 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 AKR7A3O95154 331 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 TACSTD2P09758 323 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 TNFRSF1AP19438 455 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 NFYBP25208 207 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 GRPRP30550 384 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 KCNJ10P78508 379 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 NAAAQ02083 359 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF45Q02386 682 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 SNTB2Q13425 540 aaKnown RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF787Q6DD87 383 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 OR7E24Q6IFN5 339 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 MZT2BQ6NZ67 158 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 METTL2BQ6P1Q9 378 aaKnown RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ZSWIM9Q86XI8 627 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 MFSD4AQ8N468 514 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 OR5T2Q8NGG2 359 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 FNDC9Q8TBE3 224 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF675Q8TD23 568 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 SNRNP40Q96DI7 357 aaKnown RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 METTL2AQ96IZ6 378 aaKnown RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 TSSK6Q9BXA6 273 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 C1QTNF3Q9BXJ4 246 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 SLC52A3Q9NQ40 469 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 DLL3Q9NYJ7 618 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 CISD1Q9NZ45 108 aaKnown RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 A0A1W2PR77 199 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 DAPL1A0PJW8 107 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF878C9JN71 531 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 M0R233 179 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 FGF17O60258 216 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 PRSS23O95084 383 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 APOC3P02656 99 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 PDGFAP04085 211 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 HMGN1P05114 100 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 EIF4EP06730 217 aaKnown RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 HOXD4P09016 255 aaPredicted RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 TMEM225BP0DP42 221 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 TNFSF8P32971 234 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 NAA10P41227 235 aaPredicted RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 PCBP3P57721 371 aaKnown RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ALG10Q5BKT4 473 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 BEX5Q5H9J7 111 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ARSKQ6UWY0 536 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 SLC16A12Q6ZSM3 486 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 COMMD7Q86VX2 200 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 SLITRK4Q8IW52 837 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 CCDC115Q96NT0 180 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 DHRS9Q9BPW9 319 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 LMF2Q9BU23 707 aaKnown RBP5.96□□□□□ -1.46
NEDD9-202ENST00000379446 OR52A5Q9H2C5 316 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 KLHL31Q9H511 634 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 MAGIXQ9H6Y5 334 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 ACOT13Q9NPJ3 140 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 FZR1Q9UM11 496 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 PLXNA1Q9UIW2 1896 aa5.96□□□□□ -1.46
NEDD9-202ENST00000379446 FAM171A2A8MVW0 826 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 LGI1O95970 557 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 HTR1AP08908 422 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 JUNBP17275 347 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 AP2S1P53680 142 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 CAV3P56539 151 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 HOXC5Q00444 222 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PPA1Q15181 289 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TIMM50Q3ZCQ8 353 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms